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SCNpilot_cont_500_bf_scaffold_1643

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1643_1
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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2..367
DNA (366bp) protein (122aa)
ATPase component of ABC transporter with duplicated ATPase domains n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B24EA
ATP-binding cassette sub-family F protein; K06158 ATP-binding cassette, subfamily F, member 3
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1643_2
unknown

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395..1165
DNA (771bp) protein (257aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1643_3
Brassica oleracea, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

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1237..2337
DNA (1101bp) protein (367aa)
Cysteine-rich domain protein n=1 Tax=Corynebacterium tuberculostearicum SK141 RepID=C6RBK9_9CORY
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo3g004420.1}; TaxID=109376 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.;" source="Brassica oleracea var. oleracea.;"
RBT12; repressed by TUP1 protein 1
SCNpilot_cont_500_bf_scaffold_1643_4
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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2350..2937
DNA (588bp) protein (196aa)
Phage SPO1 DNA polymerase-related protein id=4041799 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Phage SPO1 DNA polymerase-related protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1643_5
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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3145..5328
DNA (2184bp) protein (728aa)
Beta-lactamase domain protein id=4041801 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Beta-lactamase domain protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1643_6
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

5392..6963
DNA (1572bp) protein (524aa)
regulator of chromosome condensation RCC1
chromosome condensation regulator RCC1 id=5225946 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1643_7
unknown

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comp(7053..7523)
DNA (471bp) protein (157aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1643_8
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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7695..9962
DNA (2268bp) protein (756aa)
id=5226341 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7 rbh
putative cell division FtsK/SpoIIIE
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1643_9
unknown

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10137..10703
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1643_10
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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10868..11227
DNA (360bp) protein (120aa)
SSU ribosomal protein S6P id=4041917 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsF; ribosomal protein S6
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1643_11
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

11261..11704
DNA (444bp) protein (148aa)
single-strand binding protein id=5226344 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
putative Single-stranded DNA-binding protein 1
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1643_12
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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11730..11930
DNA (201bp) protein (67aa)
ribosomal protein S18 id=4041919 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7a genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsR; 30S ribosomal protein S18
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1643_13
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

11937..12503
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PL88_9BACT
putative Elongation factor P
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1643_14
unknown

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12509..13042
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1643_15
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

13048..13773
DNA (726bp) protein (242aa)
putative rRNA methyltransferase YqxC (EC:2.1.1.-)
Hemolysin A, partial id=4827930 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1643_16
unknown

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13935..14885
DNA (951bp) protein (317aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1643_17
unknown

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14885..15658
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1643_18
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(15724..16803)
DNA (1080bp) protein (360aa)
GTP-dependent nucleic acid-binding protein EngD id=4041923 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
ychF; GTP-binding protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1643_19
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

16881..18764
DNA (1884bp) protein (628aa)
Putative uncharacterized protein id=5226368 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1643_20
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

18833..20662
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSW5_9BACT
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1643_21
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

20724..21770
DNA (1047bp) protein (349aa)
id=5226369 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
pilM; Type IV pilus assembly protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1643_22
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

21767..22483
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RV21_9BACT
putative Fimbrial assembly family protein
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1643_23
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

22485..23174
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVR1_9BACT
hypothetical protein
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1643_24
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

23171..23395
DNA (225bp) protein (75aa)
hypothetical protein cdiviTM7_02684 id=4041929 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1643_25
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

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23414..25177
DNA (1764bp) protein (588aa)
Putative type II secretion system protein E n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PVS8_9BACT rbh
putative type II secretion system protein E rbh
Putative type II secretion system protein E {ECO:0000313|EMBL:AGL62360.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_cont_500_bf_scaffold_1643_26
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

25191..26258
DNA (1068bp) protein (356aa)
Twitching motility protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PYP9_9BACT rbh
pilT; twitching motility protein rbh
Twitching motility protein {ECO:0000313|EMBL:AGL62361.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_cont_500_bf_scaffold_1643_27
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

26262..27473
DNA (1212bp) protein (404aa)
Putative Type IV pilus assembly protein PilC n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PX70_9BACT
putative Type IV pilus assembly protein PilC
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1643_28
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

27555..28040
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PL99_9BACT
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1643_29
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

28111..29004
DNA (894bp) protein (298aa)
putative Prepilin peptidase (EC:3.4.23.43)
hypothetical protein cdiviTM7_02709 id=4041934 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1643_30
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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29036..29842
DNA (807bp) protein (269aa)
transmembrane_regions id=5226378 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
hypothetical protein
Tax=CG_TM7_01
Displaying items 1-30 of 36 in total

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