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SCNpilot_cont_500_bf_scaffold_3152

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3152_1
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

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3..797
DNA (795bp) protein (265aa)
Thymidylate synthase complementing protein ThyX n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDK1_CONWI
thymidylate synthase complementing protein ThyX
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
SCNpilot_cont_500_bf_scaffold_3152_2
unknown

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914..1594
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3152_3

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comp(1650..2651)
DNA (1002bp) protein (334aa)
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Ribosomal protein L1, bacterial and chloroplast form id=4440242 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
rplA; 50S ribosomal protein L1
SCNpilot_cont_500_bf_scaffold_3152_4
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(2750..3256)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVG4_9BACT
putative Type II secretion system protein G
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_3152_5
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

3326..4288
DNA (963bp) protein (321aa)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
SCNpilot_cont_500_bf_scaffold_3152_6
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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4340..6004
DNA (1665bp) protein (555aa)
Oxidoreductase (Fragment) id=3887356 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
putative oxidoreductase
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_3152_7
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

6014..6898
DNA (885bp) protein (295aa)
Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
SCNpilot_cont_500_bf_scaffold_3152_8
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(6967..7920)
DNA (954bp) protein (318aa)
Putative uncharacterized protein id=4525534 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
exported protein of unknown function
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_3152_9
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

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comp(7992..8417)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLZ0_9BACT
rplK; ribosomal protein L11 (BL11)
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_cont_500_bf_scaffold_3152_10
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(8553..9101)
DNA (549bp) protein (183aa)
Transcription antitermination protein nusG id=2440640 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
nusG; transcription antitermination factor rbh
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_3152_11
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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comp(9115..9456)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21AC
secE; preprotein translocase subunit
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_3152_12
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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9575..10711
DNA (1137bp) protein (379aa)
Glycosyl transferase, family 2 id=2440643 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
glycosyl transferase family 2 protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_3152_13
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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comp(10686..11195)
DNA (510bp) protein (170aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRX8_9BACT
putative Multi-sensor signal transduction histidine kinase
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_3152_14
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11143..12261)
DNA (1119bp) protein (373aa)
Putative Multi-sensor signal transduction histidine kinase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PWL5_9BACT
putative Multi-sensor signal transduction histidine kinase
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_3152_15
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(12306..12998)
DNA (693bp) protein (231aa)
putative zinc protease id=2440648 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_3152_16
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(13010..13618)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21AF
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_3152_17
unknown

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comp(13661..14242)
DNA (582bp) protein (194aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3152_18
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(14282..14923)
DNA (642bp) protein (214aa)
putative Glutamate racemase (EC:5.1.1.3)
Glutamate racemase id=4329628 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Glutamate racemase {ECO:0000313|EMBL:KKW02666.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
SCNpilot_cont_500_bf_scaffold_3152_19
RIFOXYB1_FULL_WS6_33_14_curated, Dojkabacteria, Bacteria

Not on your lists

comp(14920..15885)
DNA (966bp) protein (322aa)
RNA methylase (EC:2.1.1.29) id=5099829 bin=WS6_GWC1_33_20 species=GWE2_WS6_33_161 genus=GWE2_WS6_33_161 taxon_order=GWE2_WS6_33_161 taxon_class=GWE2_WS6_33_161 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
tRNA m5C48-49 methylase
Tax=RIFOXYB1_FULL_WS6_33_14_curated
SCNpilot_cont_500_bf_scaffold_3152_20
unknown

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comp(15905..16300)
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3152_21
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(16351..16824)
DNA (474bp) protein (158aa)
Fimbrial protein id=5226049 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Fimbrial protein {ECO:0000313|EMBL:AHB41984.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
exported protein of unknown function
SCNpilot_cont_500_bf_scaffold_3152_22
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16844..17584)
DNA (741bp) protein (247aa)
3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase {ECO:0000313|EMBL:AJQ97351.1}; EC=3.1.3.7 {ECO:0000313|EMBL:AJQ97351.1};; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynuella sunshinyii YC6258.;"
3'(2'),5'-bisphosphate nucleotidase; K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJF1_NEPCE
SCNpilot_cont_500_bf_scaffold_3152_23
unknown

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comp(17620..18393)
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3152_24
Propionibacterium acnes, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18398..18784)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00038052D1
MutT/Nudix family protein
Hydrolase, NUDIX family {ECO:0000313|EMBL:ADE00254.1}; TaxID=553199 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acnes (strain SK137).;"
Displaying 24 items

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