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SCNpilot_cont_750_bf_scaffold_1409

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1409_1
unknown

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1..1020
DNA (1020bp) protein (340aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1409_2
unknown

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965..1279
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1409_3
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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1329..2222
DNA (894bp) protein (298aa)
ABC transporter related protein id=4041791 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
ABC transporter ATP-binding protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_750_bf_scaffold_1409_4
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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2215..3003
DNA (789bp) protein (263aa)
Putative uncharacterized protein id=4041792 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
ABC transporter permease
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_750_bf_scaffold_1409_5
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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3000..3377
DNA (378bp) protein (126aa)
Archaea-specific enzyme related to ProFAR isomerase, putative id=3133631 bin=GWC2_TM7_48_9 species=Populus trichocarpa genus=Populus taxon_order=Malpighiales taxon_class=unknown phylum=Streptophyta tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
isomerase
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_750_bf_scaffold_1409_6
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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3399..3782
DNA (384bp) protein (128aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
peptidyl-prolyl cis-trans isomerase id=5226518 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
SCNpilot_cont_750_bf_scaffold_1409_7
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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3854..4414
DNA (561bp) protein (187aa)
hypothetical protein cdivTM_12329 id=2443936 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7a genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_750_bf_scaffold_1409_8
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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4454..5203
DNA (750bp) protein (250aa)
Fimbrial protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RWI8_9BACT
exported protein of unknown function
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_750_bf_scaffold_1409_9
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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5200..5844
DNA (645bp) protein (215aa)
putative Glutamate racemase (EC:5.1.1.3)
Putative Glutamate racemase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PND6_9BACT
Tax=CG_TM7_01
SCNpilot_cont_750_bf_scaffold_1409_10
unknown

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comp(5953..6450)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1409_11
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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6465..8591
DNA (2127bp) protein (709aa)
putative polynucleotide phosphorylase (PNPase) (EC:2.7.7.8 3.1.13.1) rbh
Polyribonucleotide nucleotidyltransferase id=4041796 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_750_bf_scaffold_1409_12
unknown

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8768..9376
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1409_13
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9419..9961
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C7D58
Uncharacterized protein {ECO:0000313|EMBL:ESY64241.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1409_14
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

9999..11666
DNA (1668bp) protein (556aa)
ATPase component of ABC transporter with duplicated ATPase domains id=2439673 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
ABC transporter-like protein
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_750_bf_scaffold_1409_15
unknown

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11727..12539
DNA (813bp) protein (271aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1409_16
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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12541..12969
DNA (429bp) protein (143aa)
Phage SPO1 DNA polymerase-related protein id=4041799 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Phage SPO1 DNA polymerase-related protein
Tax=GWC2_TM7_44_17_curated
Displaying 16 items

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