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OR_07102018_0_5m_scaffold_1255

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_1255_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..861
DNA (861bp) protein (287aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
tRNA-dihydrouridine synthase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6Q8_THIK1
nifR3 family TIM-barrel protein
OR_07102018_0_5m_scaffold_1255_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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858..1097
DNA (240bp) protein (80aa)
Transcriptional regulator, Fis family n=2 Tax=Thiomonas RepID=D5X6Q7_THIK1
putative DNA-binding protein fis
Transcriptional regulator, Fis family {ECO:0000313|EMBL:ADG32054.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07102018_0_5m_scaffold_1255_3
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1133..2683
DNA (1551bp) protein (517aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6Q6_THIK1
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07102018_0_5m_scaffold_1255_4
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2700..3281
DNA (582bp) protein (194aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
ruvC; Crossover junction endodeoxyribonuclease ruvC (Holliday junction nuclease ruvC) (Holliday juction resolvase ruvC) (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMS7_THIA3
OR_07102018_0_5m_scaffold_1255_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3379..4527
DNA (1149bp) protein (383aa)
Extracellular ligand-binding receptor n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6Q4_THIK1
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADG32051.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07102018_0_5m_scaffold_1255_6
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4574..5266)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI000361C60F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHC38413.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
OR_07102018_0_5m_scaffold_1255_7
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5502..5858
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI000370F003
2OG-Fe(II) oxygenase family oxidoreductase
Oxidoreductase, 2OG-Fe(II) oxygenase family {ECO:0000313|EMBL:EIK73173.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
OR_07102018_0_5m_scaffold_1255_8
Pseudomonas sp. RIT357, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5864..6493
DNA (630bp) protein (210aa)
translocator protein, LysE family n=1 Tax=Pseudomonas fluorescens RepID=UPI000370300D
Amino acid transporter LysE {ECO:0000313|EMBL:EZP69178.1}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT357.;"
translocator protein, LysE family
OR_07102018_0_5m_scaffold_1255_9
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6510..6644)
DNA (135bp) protein (45aa)
putative Beta-lactamase (EC:3.5.2.6)
Putative Beta-lactamase {ECO:0000313|EMBL:CAZ89849.1}; EC=3.5.2.6 {ECO:0000313|EMBL:CAZ89849.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative Beta-lactamase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMS1_THIA3
Displaying 9 items

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