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OR_07232018_dam_0_1um_scaffold_90

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_90_1
unknown

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comp(3..101)
DNA (99bp) protein (33aa)
putative permease (drug/metabolite transporter)
OR_07232018_dam_0_1um_scaffold_90_2
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(123..920)
DNA (798bp) protein (266aa)
Putative permease (Drug/metabolite transporter) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN05_THIA3
putative permease (drug/metabolite transporter)
Putative permease (Drug/metabolite transporter) {ECO:0000313|EMBL:CAZ89933.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_90_3
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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988..2457
DNA (1470bp) protein (490aa)
Putative Transcriptional regulator GntR family with aminotransferase domain n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN04_THIA3
putative Transcriptional regulator GntR family with aminotransferase domain
Putative Transcriptional regulator GntR family with aminotransferase domain {ECO:0000313|EMBL:CAZ89932.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_90_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3169..3864
DNA (696bp) protein (232aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Thiomonas RepID=D5X6Y0_THIK1
putative Permease component of tungstate ABC transporter TupB
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADG32127.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_90_5

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3861..4604
DNA (744bp) protein (248aa)
Putative ABC-type transport system, ATPase component n=1 Tax=mine drainage metagenome RepID=E6PUD3_9ZZZZ
Putative ABC-type transport system, ATPase component {ECO:0000313|EMBL:CBH98540.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ABC transporter
OR_07232018_dam_0_1um_scaffold_90_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4583..5425
DNA (843bp) protein (281aa)
Extracellular solute-binding protein family 1 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6X8_THIK1
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADG32125.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_90_7
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5427..6542)
DNA (1116bp) protein (372aa)
aroG2; Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN00_THIA3
OR_07232018_dam_0_1um_scaffold_90_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6551..8350)
DNA (1800bp) protein (600aa)
Aspartate--tRNA ligase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6X5_THIK1
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ADG32122.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
aspartyl-tRNA synthetase
OR_07232018_dam_0_1um_scaffold_90_9
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8592..9230)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Thiomonas RepID=D6CMZ7_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ89925.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_90_10
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9325..9597)
DNA (273bp) protein (91aa)
Regulatory protein, FmdB family n=2 Tax=Thiomonas RepID=D5X6X3_THIK1
hypothetical protein
Regulatory protein, FmdB family {ECO:0000313|EMBL:ADG32120.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_90_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9755..10348)
DNA (594bp) protein (198aa)
Putative general secretory pathway protein C, type II secretion system n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6X2_THIK1
general secretory pathway protein C
Putative general secretory pathway protein C, type II secretion system {ECO:0000313|EMBL:ADG32119.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_90_12
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10385..10852
DNA (468bp) protein (156aa)
LspG (Type II protein secretion LspG pseudopilin) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMZ4_THIA3
gspG; LspG precursor (Type II protein secretion LspG pseudopilin)
Pseudopilin, cryptic, general secretion pathway {ECO:0000313|EMBL:CDW93955.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_90_13
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10827..11471
DNA (645bp) protein (215aa)
General secretion pathway protein H n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6X0_THIK1
Putative Type II secretory pathway, pseudopilin PulG {ECO:0000313|EMBL:CDW93956.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
general secretion pathway protein H
OR_07232018_dam_0_1um_scaffold_90_14
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11468..11833
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMZ2_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ89920.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_90_15
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11833..12570
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6W8_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG32115.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_90_16
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12567..13541
DNA (975bp) protein (325aa)
Type II secretion system protein K n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6W7_THIK1
General secretion pathway protein K
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_90_17
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13636..14829
DNA (1194bp) protein (398aa)
Putative general secretion pathway protein L n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMY9_THIA3
Putative general secretion pathway protein L {ECO:0000313|EMBL:CDW93960.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Putative general secretion pathway protein L
OR_07232018_dam_0_1um_scaffold_90_18
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14840..15394
DNA (555bp) protein (185aa)
General secretion pathway M protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6W5_THIK1
general secretion pathway protein M
General secretion pathway M protein {ECO:0000313|EMBL:ADG32112.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_90_19
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15395..16309
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Thiomonas RepID=D6CMY7_THIA3
conserved hypothetical protein, putative exported protein
Putative general secretory pathway N transmembrane protein {ECO:0000313|EMBL:ADG32111.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_90_20
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16365..19022
DNA (2658bp) protein (886aa)
Putative general secretion pathway protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMY6_THIA3
Putative general secretion pathway protein {ECO:0000313|EMBL:CDW93963.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative general secretion pathway protein
OR_07232018_dam_0_1um_scaffold_90_21
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19038..20462
DNA (1425bp) protein (475aa)
General secretion pathway protein E (Type II traffic warden ATPase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMY5_THIA3
xcpR; General secretion pathway protein E (Type II traffic warden ATPase)
General secretory pathway component, cryptic {ECO:0000313|EMBL:CDW93964.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_90_22
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20518..21732
DNA (1215bp) protein (405aa)
General secretion pathway protein F n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6W2_THIK1
Type II secretion system protein F {ECO:0000313|EMBL:CDW93966.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
general secretion pathway protein F
OR_07232018_dam_0_1um_scaffold_90_23
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21743..22657
DNA (915bp) protein (305aa)
5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase {ECO:0000313|EMBL:ADG32108.1}; EC=3.1.3.5 {ECO:0000313|EMBL:ADG32108.1};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
5'-nucleotidase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6W1_THIK1
OR_07232018_dam_0_1um_scaffold_90_24
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22755..23252
DNA (498bp) protein (166aa)
tpx; Thiol peroxidase (Scavengase P20) (EC:1.11.1.-)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269, ECO:0000313|EMBL:CAZ89910.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Probable thiol peroxidase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMY2_THIA3
OR_07232018_dam_0_1um_scaffold_90_25
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23329..24264
DNA (936bp) protein (312aa)
Branched-chain amino acid aminotransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6V9_THIK1
branched-chain amino acid aminotransferase
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ADG32106.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_90_26
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24297..24497
DNA (201bp) protein (67aa)
Zinc finger, CHCC-type n=2 Tax=Thiomonas RepID=D5X6V8_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDW93970.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_90_27
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24519..25589
DNA (1071bp) protein (357aa)
Putative lipopolysaccharide heptosyltransferase II n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMX9_THIA3
Putative lipopolysaccharide heptosyltransferase II
Putative lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:CAZ89907.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_90_28
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25590..26138)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6V6_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG32103.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_90_29
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26411..26833
DNA (423bp) protein (141aa)
ATP synthase I chain n=2 Tax=Thiomonas RepID=D5X6V5_THIK1
hypothetical protein
ATP synthase I chain {ECO:0000313|EMBL:ADG32102.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_90_30
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26881..27735
DNA (855bp) protein (285aa)
putative ATP synthase a chain (ATPase protein 6) AtpB (EC:3.6.3.14)
ATP synthase subunit a n=2 Tax=Thiomonas RepID=D5X6V4_THIK1
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Displaying items 1-30 of 73 in total

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