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OR_07232018_dam_0_1um_scaffold_266

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_266_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..441
DNA (441bp) protein (147aa)
Transposase IS66 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1A6_THIK1
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:ADG30902.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_266_2
unknown

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434..580
DNA (147bp) protein (49aa)

This feature has no annotations

OR_07232018_dam_0_1um_scaffold_266_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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678..851
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:CDQ11823.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
OR_07232018_dam_0_1um_scaffold_266_4

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848..1375
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PLG3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH95764.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
OR_07232018_dam_0_1um_scaffold_266_trna_1
unknown

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comp(2047..2134)
DNA (88bp)
transferRNA Ser
OR_07232018_dam_0_1um_scaffold_266_5
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2190..4169)
DNA (1980bp) protein (660aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Acetyl-coenzyme A synthetase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X363_THIK1
acetate/CoA ligase
OR_07232018_dam_0_1um_scaffold_266_6
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4368..5021
DNA (654bp) protein (218aa)
UPF0114 protein THI_2398 n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUR1_THIA3
conserved hypothetical protein, PipA
UPF0114 protein THI_2398 {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_266_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5070..6608
DNA (1539bp) protein (513aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X365_THIK1
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit {ECO:0000313|EMBL:ADG31423.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_266_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6826..7629
DNA (804bp) protein (268aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Glutamate racemase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X367_THIK1
OR_07232018_dam_0_1um_scaffold_266_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7704..8819
DNA (1116bp) protein (372aa)
Putative NADPH dehydrogenase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUR5_THIA3
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ADG31426.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_266_10
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9192..10622
DNA (1431bp) protein (477aa)
Cytochrome c class I n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X369_THIK1
Cytochrome c class I {ECO:0000313|EMBL:CDW92243.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
cytochrome c class I
OR_07232018_dam_0_1um_scaffold_266_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10624..11859
DNA (1236bp) protein (412aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X370_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31428.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_266_12
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11869..12255
DNA (387bp) protein (129aa)
Putative cytochrome c subunit of the sulfide dehydrogenase FccA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUR8_THIA3
Putative cytochrome c subunit of the sulfide dehydrogenase FccA {ECO:0000313|EMBL:CDW92245.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative cytochrome c subunit of the sulfide dehydrogenase FccA
OR_07232018_dam_0_1um_scaffold_266_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12266..13603
DNA (1338bp) protein (446aa)
Putative sulfide dehydrogenase [flavocytochrome c] flavoprotein chain (FC) (FCSD) (Flavocytochrome c flavoprotein subunit FccB) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUR9_THIA3
Putative sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor (FC) (FCSD) (Flavocytochrome c flavoprotein subunit FccB)
Putative sulfide dehydrogenase [flavocytochrome c] flavoprotein chain (FC) (FCSD) (Flavocytochrome c flavoprotein subunit FccB) {ECO:0000313|EMBL:CAZ89038.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_266_14
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13600..14358
DNA (759bp) protein (253aa)
Cytochrome c class I n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X373_THIK1
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ADG31431.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_266_15
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14378..14881)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUS1_THIA3
conserved hypothetical protein; putative exported protein; putative TPR repeat
Uncharacterized protein {ECO:0000313|EMBL:CAZ89040.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_266_16
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15959..16765)
DNA (807bp) protein (269aa)
Putative Phosphotransferase system, fructose-specific IIC component n=2 Tax=Thiomonas RepID=D6CUS3_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW92250.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Phosphotransferase system, fructose-specific IIC component
OR_07232018_dam_0_1um_scaffold_266_17
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16942..18231)
DNA (1290bp) protein (430aa)
Sulfide-quinone reductase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUS4_THIA3
sqr; Sulfide-quinone reductase
Sulfide-quinone reductase {ECO:0000313|EMBL:CAZ89043.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_266_18
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18670..19179
DNA (510bp) protein (170aa)
Putative transporter n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUS5_THIA3
putative transporter
Putative transporter {ECO:0000313|EMBL:CAZ89044.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_266_19
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19176..19781
DNA (606bp) protein (202aa)
Putative transporter n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUS6_THIA3
putative transporter
Putative transporter {ECO:0000313|EMBL:CAZ89045.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_266_20
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19897..20145
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Thiomonas RepID=D6CUS7_THIA3
hypothetical protein; putative exported protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31438.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_266_21
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20260..20913
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X381_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31439.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_266_22
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20975..21961
DNA (987bp) protein (329aa)
Putative thiosulfate sulfurtransferase, cysA (EC:2.8.1.2)
Putative thiosulfate sulfurtransferase, cysA {ECO:0000313|EMBL:CAZ89048.1}; EC=2.8.1.2 {ECO:0000313|EMBL:CAZ89048.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative thiosulfate sulfurtransferase, cysA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUS9_THIA3
OR_07232018_dam_0_1um_scaffold_266_23
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22227..22844
DNA (618bp) protein (206aa)
Putative Polysaccharide export protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUT0_THIA3
putative Polysaccharide export protein
Putative Polysaccharide export protein {ECO:0000313|EMBL:CAZ89049.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_266_24
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22885..24546
DNA (1662bp) protein (554aa)
PEP-CTERM system associated protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X384_THIK1
PEP-CTERM system associated protein {ECO:0000313|EMBL:CDW92259.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
PEP-CTERM system associated protein
OR_07232018_dam_0_1um_scaffold_266_25
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24555..25379
DNA (825bp) protein (275aa)
Putative fused protein UDP-N-acetylglucosamine 2-epimerase: transport, ATPase component {ECO:0000313|EMBL:CAZ89051.1}; EC=5.1.3.14 {ECO:0000313|EMBL:CAZ89051.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative fused protein UDP-N-acetylglucosamine 2-epimerase: transport, ATPase component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUT2_THIA3
secretion ATPase
Displaying 26 items

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