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OR_07232018_dam_0_1um_scaffold_270

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_270_1
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..205
DNA (204bp) protein (68aa)
DNA repair protein radC n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTS4_THIA3
radC; DNA repair protein radC
DNA repair protein radC {ECO:0000313|EMBL:CAZ88693.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_270_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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202..900
DNA (699bp) protein (233aa)
Smr protein/MutS2 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1M4_THIK1
Smr protein/MutS2
Smr protein/MutS2 {ECO:0000313|EMBL:ADG31020.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_270_3
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(938..1198)
DNA (261bp) protein (87aa)
Globin n=2 Tax=Thiomonas RepID=D5X1M5_THIK1
putative Protozoan/cyanobacterial globin
Putative Protozoan/cyanobacterial globin {ECO:0000313|EMBL:CDW95831.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_270_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1195..1434)
DNA (240bp) protein (80aa)
Globin n=2 Tax=Thiomonas RepID=D5X1M5_THIK1
putative Protozoan/cyanobacterial globin
Globin {ECO:0000313|EMBL:ADG31021.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_270_5
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1547..4075)
DNA (2529bp) protein (843aa)
Putative ABC-type transport system, permease component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTS7_THIA3
putative ABC-type transport system, permease component
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:CAZ88696.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_270_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4770..5282
DNA (513bp) protein (171aa)
Integrase catalytic region n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYS7_THIK1
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ADG32254.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_270_7
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5426..6493
DNA (1068bp) protein (356aa)
transposase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000362ED50
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ADG20774.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
OR_07232018_dam_0_1um_scaffold_270_8
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6925..7368
DNA (444bp) protein (148aa)
BLUF domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5X2_THIK1
BLUF domain protein {ECO:0000313|EMBL:CDW94439.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
BLUF domain-containing protein
OR_07232018_dam_0_1um_scaffold_270_9
Hydrogenobaculum sp. HO, Hydrogenobaculum, Aquificales, Aquificae, Aquificae, Bacteria

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comp(8358..8957)
DNA (600bp) protein (200aa)
Diguanylate phosphodiesterase n=4 Tax=Hydrogenobaculum RepID=M1RM18_9AQUI
EAL domain-containing protein
Diguanylate phosphodiesterase {ECO:0000313|EMBL:AGG15904.1}; TaxID=547144 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobaculum.;" source="Hydrogenobaculum sp. HO.;"
OR_07232018_dam_0_1um_scaffold_270_10
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9828..12401
DNA (2574bp) protein (858aa)
DNA mismatch repair protein MutS n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT48_THIA3
mutS; DNA mismatch repair protein
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_270_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12431..13219)
DNA (789bp) protein (263aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
GTP cyclohydrolase FolE2 n=2 Tax=Thiomonas RepID=D6CT47_THIA3
hypothetical protein
OR_07232018_dam_0_1um_scaffold_270_12
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13341..14141)
DNA (801bp) protein (267aa)
High-affinity zinc uptake ABC system membrane protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT45_THIA3
znuB; High-affinity zinc uptake ABC system membrane protein
High-affinity zinc uptake ABC system membrane protein {ECO:0000313|EMBL:CAZ88464.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_270_13
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14134..14904)
DNA (771bp) protein (257aa)
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
ABC transporter related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1I9_THIK1
ABC transporter
OR_07232018_dam_0_1um_scaffold_270_14
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14970..15950
DNA (981bp) protein (327aa)
Periplasmic solute binding protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1J0_THIK1
periplasmic solute binding protein
Periplasmic solute binding protein {ECO:0000313|EMBL:ADG30986.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_270_15
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15966..17879)
DNA (1914bp) protein (638aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT42_THIA3
OR_07232018_dam_0_1um_scaffold_270_16
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17890..18396)
DNA (507bp) protein (169aa)
Putative Disulfide bond formation protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT41_THIA3
putative Disulfide bond formation protein
Putative Disulfide bond formation protein {ECO:0000313|EMBL:CAZ88460.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_270_17
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18428..19423)
DNA (996bp) protein (332aa)
Geranyltranstransferase {ECO:0000313|EMBL:CDW95649.1}; EC=2.5.1.1 {ECO:0000313|EMBL:CDW95649.1};; EC=2.5.1.10 {ECO:0000313|EMBL:CDW95649.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
ispA; Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) (EC:2.5.1.10)
Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT40_THIA3
OR_07232018_dam_0_1um_scaffold_270_18
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19464..19757
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:CDW95647.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_270_19
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19851..20957
DNA (1107bp) protein (369aa)
putative Choline monooxygenase with Rieske [2Fe-2S] domain, alcE (EC:1.14.15.7)
Putative Choline monooxygenase with Rieske [2Fe-2S] domain, alcE {ECO:0000313|EMBL:CAZ88457.1}; EC=1.14.15.7 {ECO:0000313|EMBL:CAZ88457.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative Choline monooxygenase with Rieske [2Fe-2S] domain, alcE n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT38_THIA3
OR_07232018_dam_0_1um_scaffold_270_20
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20990..21853
DNA (864bp) protein (288aa)
Rhodanese domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1J6_THIK1
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
rhodanese domain-containing protein
OR_07232018_dam_0_1um_scaffold_270_21
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22035..22469
DNA (435bp) protein (145aa)
Universal stress protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT35_THIA3
putative universal stress protein UspA/Adenine nucleotide alpha hydrolases-like
Putative universal stress protein UspA/Adenine nucleotide alpha hydrolases-like {ECO:0000313|EMBL:CAZ88454.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_270_22
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22533..22967
DNA (435bp) protein (145aa)
UspA domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1J8_THIK1
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ADG30994.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_270_23
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22999..23988)
DNA (990bp) protein (330aa)
Carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:ADG30995.1}; EC=3.1.1.45 {ECO:0000313|EMBL:ADG30995.1};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Carboxymethylenebutenolidase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1J9_THIK1
OR_07232018_dam_0_1um_scaffold_270_24
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24250..24825)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT32_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ88451.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_270_25
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24822..25889)
DNA (1068bp) protein (356aa)
putative adenosine deaminase (EC:3.5.4.4)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01962}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative adenosine deaminase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT31_THIA3
OR_07232018_dam_0_1um_scaffold_270_26
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25960..26205)
DNA (246bp) protein (82aa)
acetyltransferase (EC:2.3.1.-)
Conserved hypothetical acetyltransferase {ECO:0000313|EMBL:CAL96326.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAL96326.1};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Conserved hypothetical acetyltransferase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KBX0_AZOSB
Displaying 26 items

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