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OR_07232018_dam_0_1um_scaffold_360

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_360_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..152
DNA (150bp) protein (50aa)
Putative flagellin n=1 Tax=mine drainage metagenome RepID=E6PMC2_9ZZZZ
putative flagellin (fla or fliC)
Flagellin domain protein {ECO:0000313|EMBL:ADG30594.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_360_2
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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269..691
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQD6_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ88216.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_360_3
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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770..2728
DNA (1959bp) protein (653aa)
Putative Flagellar hook-associated protein 2 (FliD) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQD7_THIA3
Putative Flagellar hook-associated protein 2 (FliD) {ECO:0000313|EMBL:CAZ88217.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
putative Flagellar hook-associated protein 2 (FliD)
OR_07232018_dam_0_1um_scaffold_360_4
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2753..3154
DNA (402bp) protein (134aa)
Flagellar protein FliS n=2 Tax=Thiomonas RepID=D5X0F1_THIK1
Flagellar protein FliS {ECO:0000313|EMBL:CDW95371.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Flagellar protein FliS
OR_07232018_dam_0_1um_scaffold_360_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3226..3831
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0F2_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30598.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_360_6
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3858..4733
DNA (876bp) protein (292aa)
Putative outer membrane OmpA/MotB protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQE0_THIA3
putative outer membrane OmpA/MotB protein
Putative outer membrane OmpA/MotB protein {ECO:0000313|EMBL:CAZ88220.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_360_7
unknown

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4684..5553
DNA (870bp) protein (290aa)

This feature has no annotations

OR_07232018_dam_0_1um_scaffold_360_8
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5546..6649
DNA (1104bp) protein (368aa)
Flagellar sigma-54 dependent transcriptional activator FleQ n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQE2_THIA3
Type 4 fimbriae expression regulatory protein PilR {ECO:0000313|EMBL:CDW95377.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
fleQ; Flagellar sigma-54 dependent transcriptional activator FleQ
OR_07232018_dam_0_1um_scaffold_360_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6712..8208
DNA (1497bp) protein (499aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0F5_THIK1
two component Fis family sigma54-specific transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADG30601.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_360_10
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8307..8660
DNA (354bp) protein (118aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQE4_THIA3
putative Flagellar hook-basal body complex protein FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_360_11
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8694..10388
DNA (1695bp) protein (565aa)
Flagellar M-ring protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQE5_THIA3
putative Flagellar M-ring protein FliF
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_360_12
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10378..11394
DNA (1017bp) protein (339aa)
Flagellar motor switch protein FliG n=2 Tax=Thiomonas RepID=D5X0F8_THIK1
fliG; Flagellar motor switch protein fliG
Flagellar motor switch protein fliG {ECO:0000313|EMBL:CAZ88226.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_360_13
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11425..12159
DNA (735bp) protein (245aa)
Putative Flagellar assembly protein fliH n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQE7_THIA3
Flagellar assembly protein FliH/Type III secretion system HrpE {ECO:0000313|EMBL:CDW95383.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Flagellar assembly protein fliH
OR_07232018_dam_0_1um_scaffold_360_14
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12156..13541
DNA (1386bp) protein (462aa)
fliI; flagellum-specific ATP synthase (EC:3.6.3.14)
Flagellum-specific ATP synthase {ECO:0000313|EMBL:CAZ88228.1}; EC=3.6.3.14 {ECO:0000313|EMBL:CAZ88228.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Flagellum-specific ATP synthase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQE8_THIA3
OR_07232018_dam_0_1um_scaffold_360_15
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13630..14121
DNA (492bp) protein (164aa)
Flagellar export protein FliJ n=2 Tax=Thiomonas RepID=D5X0G1_THIK1
putative Flagellar fliJ protein
Putative Flagellar fliJ protein {ECO:0000313|EMBL:CAZ88229.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_360_16
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14194..15498
DNA (1305bp) protein (435aa)
Putative flagellar hook-length control protein FliK n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQF0_THIA3
putative flagellar hook-length control protein FliK
Putative flagellar hook-length control protein FliK {ECO:0000313|EMBL:CAZ88230.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_360_17
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15660..16229
DNA (570bp) protein (190aa)
Flagellar basal body-associated protein FliL n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0G3_THIK1
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:CDW95390.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
flagellar basal body-associated protein FliL
OR_07232018_dam_0_1um_scaffold_360_18
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16312..17322
DNA (1011bp) protein (337aa)
Flagellar motor switch protein FliM n=2 Tax=Thiomonas RepID=D5X0G4_THIK1
fliM; Flagellar motor switch
Flagellar motor switch {ECO:0000313|EMBL:CAZ88232.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_360_19
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17352..17798
DNA (447bp) protein (149aa)
Flagellar motor switch protein FliN n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0G5_THIK1
flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:ADG30611.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_360_trna_1
unknown

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comp(17905..17978)
DNA (74bp)
transferRNA Pro
OR_07232018_dam_0_1um_scaffold_360_20
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18010..18531)
DNA (522bp) protein (174aa)
Transcriptional regulator, MerR family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0W8_THIK1
merR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ADG30764.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_360_21
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18845..19147)
DNA (303bp) protein (101aa)
Putative transmembrane protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0I7_THIK1
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:ADG30633.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Displaying 22 items

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