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OR_07232018_dam_0_1um_scaffold_361

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_361_1
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..543
DNA (543bp) protein (181aa)
phosphate transporter permease subunit PstC n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B50A10
phosphate transport system permease
Phosphate transport system permease protein PstC {ECO:0000313|EMBL:EWS54779.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
OR_07232018_dam_0_1um_scaffold_361_2
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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540..1418
DNA (879bp) protein (293aa)
Phosphate ABC transporter, inner membrane subunit PstA n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZH8_VARPE
Uncharacterized protein {ECO:0000313|EMBL:KGM39108.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
phosphate ABC transporter inner membrane subunit psta
OR_07232018_dam_0_1um_scaffold_361_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1428..2210
DNA (783bp) protein (261aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
phosphate ABC transporter ATP-binding protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037730BF
pstB; phosphate transport ATP-binding protein
OR_07232018_dam_0_1um_scaffold_361_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2267..2974
DNA (708bp) protein (236aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Thiomonas RepID=D5X1U2_THIK1
phoU; negative regulator of PhoR/PhoB two-component regulator
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_361_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3006..3740
DNA (735bp) protein (245aa)
Phosphate regulon transcriptional regulatory protein phoB n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CU22_THIA3
phoB; Phosphate regulon transcriptional regulatory protein phoB
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADG31087.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_361_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3906..5255
DNA (1350bp) protein (450aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Phosphate regulon sensor protein phoR (EC:2.7.13.3)
Putative Phosphate regulon sensor protein phoR n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CU21_THIA3
OR_07232018_dam_0_1um_scaffold_361_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5252..7342)
DNA (2091bp) protein (697aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1T9_THIK1
OR_07232018_dam_0_1um_scaffold_361_8
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7475..9010
DNA (1536bp) protein (512aa)
Exopolyphosphatase {ECO:0000313|EMBL:CDW95982.1}; EC=3.6.1.11 {ECO:0000313|EMBL:CDW95982.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Guanosine-5'-triphosphate,3'-diphosphate diphosphatase GppA (EC:3.6.1.40)
Putative Guanosine-5'-triphosphate,3'-diphosphate diphosphatase GppA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CU19_THIA3
OR_07232018_dam_0_1um_scaffold_361_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9059..9676
DNA (618bp) protein (206aa)
Phosphoglycerate mutase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1T7_THIK1
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ADG31083.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_361_10
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9673..10053
DNA (381bp) protein (127aa)
Histidine triad (HIT) protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1T6_THIK1
Histidine triad (HIT) protein {ECO:0000313|EMBL:CDW95980.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
histidine triad (HIT) protein
OR_07232018_dam_0_1um_scaffold_361_11
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10545..11903
DNA (1359bp) protein (453aa)
putative Cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Putative Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:CAZ88785.1}; EC=2.1.1.79 {ECO:0000313|EMBL:CAZ88785.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CU16_THIA3
OR_07232018_dam_0_1um_scaffold_361_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11922..12248)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1T0_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31076.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_361_13
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12245..12628)
DNA (384bp) protein (128aa)
Putative fluoride ion transporter CrcB n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1S9_THIK1
CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_361_14
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12969..14399
DNA (1431bp) protein (477aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Fumarate hydratase class II n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1S2_THIK1
class II fumarate hydratase
OR_07232018_dam_0_1um_scaffold_361_15
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14405..15622)
DNA (1218bp) protein (406aa)
Biotin biosynthesis cytochrome P450-like enzyme {ECO:0000313|EMBL:CDW96402.1}; EC=1.14.13.151 {ECO:0000313|EMBL:CDW96402.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
bioI; Biotin biosynthesis cytochrome P450-like enzyme (EC:1.14.13.151)
Biotin biosynthesis cytochrome P450-like enzyme n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUL8_THIA3
OR_07232018_dam_0_1um_scaffold_361_16
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15619..16341)
DNA (723bp) protein (241aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUM0_THIA3
OR_07232018_dam_0_1um_scaffold_361_17
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16338..17567)
DNA (1230bp) protein (410aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase 2 {ECO:0000255|HAMAP-Rule:MF_01693}; Short=AONS 2 {ECO:0000255|HAMAP-Rule:MF_01693};; EC=2.3.1.47 {ECO:0000255|HAMAP-Rule:MF_01693};; 7-keto-8-amino-pelargonic acid synthase 2 {ECO:0000255|HAMAP-Rule:MF_01693}; Short=7-KAP synthase 2 {ECO:0000255|HAMAP-Rule:MF_01693};; Short=KAPA synthase 2;; 8-amino-7-ketopelargonate synthase 2 {ECO:0000255|HAMAP-Rule:MF_01693}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
8-amino-7-oxononanoate synthase 2 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=BIOF2_POLSJ
OR_07232018_dam_0_1um_scaffold_361_18
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17533..18915)
DNA (1383bp) protein (461aa)
bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (7,8-diamino-pelargonic acid aminotransferase) (DAPA aminotransferase) (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (7,8-diamino-pelargonic acid aminotransferase) (DAPA aminotransferase) {ECO:0000313|EMBL:CAZ88991.1}; EC=2.6.1.62 {ECO:0000313|EMBL:CAZ88991.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (7,8-diamino-pelargonic acid aminotransferase) (DAPA aminotransferase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUM2_THIA3
Displaying 18 items

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