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OR_07232018_dam_0_1um_scaffold_441

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_441_1
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..286
DNA (285bp) protein (95aa)
Putative Sodium/hydrogen exchanger n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLL4_THIA3
putative Sodium/hydrogen exchanger
Putative Sodium/hydrogen exchanger {ECO:0000313|EMBL:CAZ89442.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_441_2
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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283..1413
DNA (1131bp) protein (377aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
ybdK; Carboxylate-amine ligase (EC:6.3.-.-)
Carboxylate-amine ligase THI_2833 n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLL5_THIA3
OR_07232018_dam_0_1um_scaffold_441_3
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1441..3213)
DNA (1773bp) protein (591aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
putative LIPID A EXPORT ATP-BINDING/PERMEASE PROTEIN MSBA (EC:3.6.3.44)
Putative LIPID A EXPORT ATP-BINDING/PERMEASE PROTEIN MSBA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLL8_THIA3
OR_07232018_dam_0_1um_scaffold_441_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3222..4463
DNA (1242bp) protein (414aa)
O-antigen polymerase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5A2_THIK1
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ADG31795.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_441_5
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4476..5249
DNA (774bp) protein (258aa)
Lipopolysaccharide core biosynthesis glycosyltransferase WaaE {ECO:0000313|EMBL:CDW93263.1}; EC=2.4.-.- {ECO:0000313|EMBL:CDW93263.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Putative Glycosyl transferase, family 2 n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLM0_THIA3
putative Glycosyl transferase, family 2
OR_07232018_dam_0_1um_scaffold_441_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5332..6099
DNA (768bp) protein (256aa)
Glycosyl transferase family 2 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5A4_THIK1
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADG31797.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_441_7
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6279..7595
DNA (1317bp) protein (439aa)
Protein TolB n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLM2_THIA3
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Protein tolB precursor
OR_07232018_dam_0_1um_scaffold_441_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7672..8214
DNA (543bp) protein (181aa)
Peptidoglycan-associated lipoprotein (19 kDa surface antigen) (PPL) n=2 Tax=Thiomonas RepID=D6CLM3_THIA3
pal; Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL)
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:ADG31799.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_441_9
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8211..9029
DNA (819bp) protein (273aa)
Putative Tol-Pal system, YbgF protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLM4_THIA3
Putative Tol-Pal system, YbgF protein {ECO:0000313|EMBL:CDW93266.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Tol-Pal system, YbgF protein
OR_07232018_dam_0_1um_scaffold_441_10

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9026..9727
DNA (702bp) protein (234aa)
Queuosine biosynthesis protein queC {ECO:0000313|EMBL:CBH95778.1}; EC=3.5.-.- {ECO:0000313|EMBL:CBH95778.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Queuosine biosynthesis protein queC n=1 Tax=mine drainage metagenome RepID=E6PLH7_9ZZZZ
exsB protein
OR_07232018_dam_0_1um_scaffold_441_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9835..10950
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5A8_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31801.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_441_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10950..11750
DNA (801bp) protein (267aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5A9_THIK1
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ADG31802.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_441_trna_1
unknown

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11772..11851
DNA (80bp)
transferRNA Lys
OR_07232018_dam_0_1um_scaffold_441_trna_2
unknown

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11876..11948
DNA (73bp)
transferRNA Lys
OR_07232018_dam_0_1um_scaffold_441_13

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12433..12882
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PLH1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH95772.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
integrase
OR_07232018_dam_0_1um_scaffold_441_14

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12879..13337
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PLH1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH95772.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Phage integrase
OR_07232018_dam_0_1um_scaffold_441_15
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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13441..13716
DNA (276bp) protein (92aa)
Prevent-host-death family protein n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RNC2_ASTEC
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ADU14021.1}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
OR_07232018_dam_0_1um_scaffold_441_16
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13716..14057
DNA (342bp) protein (114aa)
plasmid stabilization protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037D10F7
RelE/StbE family addiction module toxin
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
OR_07232018_dam_0_1um_scaffold_441_17
unknown

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comp(14506..14784)
DNA (279bp) protein (93aa)

This feature has no annotations

OR_07232018_dam_0_1um_scaffold_441_18
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15153..16154)
DNA (1002bp) protein (334aa)
Protein rdoA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS19_THIA3
rdoA; Protein rdoA
Protein rdoA {ECO:0000313|EMBL:CAZ87410.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_441_19
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16151..16621)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS18_THIA3
conserved hypothetical protein yaeQ
Uncharacterized protein {ECO:0000313|EMBL:CAZ87409.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Displaying 21 items

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