ggKbase home page

OR_07232018_dam_0_1um_scaffold_529

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_529_1
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..991
DNA (990bp) protein (330aa)
putative ABC-type Phosphonate and Molybdate transport system, ATPase component, ybhF (EC:3.6.3.28)
Putative ABC-type Phosphonate and Molybdate transport system, ATPase component, ybhF n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUB8_THIA3
Putative transporter fused subunits of ABC superfamily: ATP-binding components {ECO:0000313|EMBL:CDW95151.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_529_2
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1004..2119
DNA (1116bp) protein (372aa)
Putative ABC-type transport system, permease component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUB7_THIA3
putative ABC-type transport system, permease component
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:CAZ88886.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_529_3
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2206..3315
DNA (1110bp) protein (370aa)
ABC-2 type transporter n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X233_THIK1
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:ADG31179.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_529_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3349..3684
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X232_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31178.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_529_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3807..4325
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X150_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30846.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_529_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4505..5086)
DNA (582bp) protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1Q6_THIK1
OR_07232018_dam_0_1um_scaffold_529_7
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5161..6489)
DNA (1329bp) protein (443aa)
xseA; Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTY6_THIA3
OR_07232018_dam_0_1um_scaffold_529_8
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7195..9528
DNA (2334bp) protein (778aa)
RNA polymerase sigma factor RpoD n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTX7_THIA3
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
rpoD; RNA polymerase sigma factor rpoD (Sigma-70)
OR_07232018_dam_0_1um_scaffold_529_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9585..10505
DNA (921bp) protein (307aa)
Adenylate/guanylate cyclase n=2 Tax=Thiomonas RepID=D5X1P5_THIK1
adenylate/guanylate cyclase
Adenylate/guanylate cyclase {ECO:0000313|EMBL:ADG31041.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_529_10
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10690..11787
DNA (1098bp) protein (366aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hemH; Ferrochelatase (Protoheme ferro-lyase) (Heme synthetase) (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTX5_THIA3
OR_07232018_dam_0_1um_scaffold_529_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11799..11918)
DNA (120bp) protein (40aa)
Redoxin domain-containing protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1P3_THIK1
redoxin domain-containing protein
Redoxin domain-containing protein {ECO:0000313|EMBL:ADG31039.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_529_12
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12014..12427)
DNA (414bp) protein (138aa)
msrB; Peptide methionine sulfoxide reductase msrB (Peptide-methionine (R)-S-oxide reductase) (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTE1_THIA3
OR_07232018_dam_0_1um_scaffold_529_13
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12439..14025)
DNA (1587bp) protein (529aa)
UPF0061 protein Tint_1494 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X180_THIK1
hypothetical protein
UPF0061 protein Tint_1494 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_529_14
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14053..14283
DNA (231bp) protein (77aa)
Methylated-DNA/protein-cysteine methyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X179_THIK1
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:CDW95781.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
methylated-DNA--protein-cysteine methyltransferase
Displaying 14 items

View Taxonomy