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OR_07232018_dam_0_1um_scaffold_930

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_930_1
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..815)
DNA (813bp) protein (271aa)
isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase (NAD) catalytic subunit 5, mitochondrial {ECO:0000313|EMBL:CDW94282.1}; EC=1.1.1.41 {ECO:0000313|EMBL:CDW94282.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Isocitrate dehydrogenase (NAD(+)) n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5G0_THIK1
OR_07232018_dam_0_1um_scaffold_930_2
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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919..1377
DNA (459bp) protein (153aa)
Putative Signal transduction histidine kinase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLU2_THIA3
putative Signal transduction histidine kinase
Putative Signal transduction histidine kinase {ECO:0000313|EMBL:CAZ89520.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_930_3
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1381..3681)
DNA (2301bp) protein (767aa)
Putative glycosyltransferase with thioredoxin domain n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLU3_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW94278.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative glycosyltransferase with thioredoxin domain
OR_07232018_dam_0_1um_scaffold_930_4
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3681..4949)
DNA (1269bp) protein (423aa)
cca; Multifunctional CCA protein [Includes: CCA-adding enzyme (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase; 2',3'-cyclic phosphodiesterase; Phosphatase] (EC:2.7.7.72 3.1.3.- 3.1.4.-)
Multifunctional CCA protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLU4_THIA3
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_930_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5030..5803)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5G4_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31857.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_930_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6064..8505
DNA (2442bp) protein (814aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5G5_THIK1
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ADG31858.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_930_7
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8531..8767)
DNA (237bp) protein (79aa)
fadD; Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase) (Acyl-CoA synthetase) (EC:6.2.1.3)
Acyl-CoA synthetase (Long-chain-fatty-acid--CoA ligase) {ECO:0000313|EMBL:CDW94272.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CDW94272.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase) (Acyl-CoA synthetase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLU6_THIA3
OR_07232018_dam_0_1um_scaffold_930_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8767..10059)
DNA (1293bp) protein (431aa)
fadD; Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase) (Acyl-CoA synthetase) (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase) (Acyl-CoA synthetase) {ECO:0000313|EMBL:CAZ89524.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CAZ89524.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase) (Acyl-CoA synthetase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLU6_THIA3
OR_07232018_dam_0_1um_scaffold_930_9
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10174..12090)
DNA (1917bp) protein (639aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
rep; ATP-dependent DNA helicase (EC:3.6.1.-)
UvrD/REP helicase n=1 Tax=Thauera phenylacetica B4P RepID=N6YW13_9RHOO
OR_07232018_dam_0_1um_scaffold_930_10
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12163..12831)
DNA (669bp) protein (223aa)
Glutathione S-transferase domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5G8_THIK1
Glutathione S-transferase domain protein {ECO:0000313|EMBL:CDW94269.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
glutathione S-transferase
OR_07232018_dam_0_1um_scaffold_930_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12942..13931)
DNA (990bp) protein (330aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5G9_THIK1
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADG31862.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_930_12
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13965..16049)
DNA (2085bp) protein (695aa)
Lytic transglycosylase catalytic n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5H0_THIK1
Lytic transglycosylase catalytic {ECO:0000313|EMBL:CDW94265.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
lytic transglycosylase
OR_07232018_dam_0_1um_scaffold_930_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16072..16692
DNA (621bp) protein (207aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative 5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLV1_THIA3
putative 5-formyltetrahydrofolate cyclo-ligase
OR_07232018_dam_0_1um_scaffold_930_14
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16689..17054
DNA (366bp) protein (122aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5H2_THIK1
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC
Displaying 14 items

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