ggKbase home page

OR_07232018_dam_0_1um_scaffold_1350

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_1350_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..235
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00036BF0CD
Integrase/recombinase {ECO:0000313|EMBL:EHL21620.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
integron integrase
OR_07232018_dam_0_1um_scaffold_1350_2
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258..887
DNA (630bp) protein (210aa)
lysine transporter LysE n=1 Tax=Burkholderia sp. JPY251 RepID=UPI0003678FAD
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:CDW93611.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
lysE_yggA; lysine exporter protein LysE/YggA
OR_07232018_dam_0_1um_scaffold_1350_3
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1017..1403)
DNA (387bp) protein (129aa)
Putative death-on-curing protein Doc n=1 Tax=mine drainage metagenome RepID=E6PMP4_9ZZZZ
Death-on-curing protein Doc {ECO:0000313|EMBL:CDW93612.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
death-on-curing family protein
OR_07232018_dam_0_1um_scaffold_1350_4
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1400..1624)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PMP5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDW93613.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
addiction module antidote
OR_07232018_dam_0_1um_scaffold_1350_5
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1720..2241
DNA (522bp) protein (174aa)
Putative Urease accessory protein UreE n=1 Tax=mine drainage metagenome RepID=E6PMP6_9ZZZZ
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
ureE; Urease accessory protein UreE
OR_07232018_dam_0_1um_scaffold_1350_6
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2183..2962
DNA (780bp) protein (260aa)
Urease accessory protein UreF n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CNM7_THIA3
ureF; urease accessory protein UreF
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385, ECO:0000313|EMBL:CAZ90155.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_1350_7

Not on your lists

2959..3642
DNA (684bp) protein (228aa)
Urease accessory protein n=1 Tax=mine drainage metagenome RepID=E6PMP8_9ZZZZ
Urease accessory protein {ECO:0000313|EMBL:CBH96200.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ureG; urease accessory protein
OR_07232018_dam_0_1um_scaffold_1350_8
unknown

Not on your lists

comp(3824..3913)
DNA (90bp) protein (30aa)

This feature has no annotations

OR_07232018_dam_0_1um_scaffold_1350_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3948..6146)
DNA (2199bp) protein (733aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Catalase-peroxidase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X3T9_THIK1
catalase/peroxidase HPI
Displaying 9 items

View Taxonomy