ggKbase home page

PLM3-1_50_b2_sep16_scaffold_4410

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b2_sep16_scaffold_4410_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(293..1138)
DNA (846bp) protein (282aa)
dioxygenase
hypothetical protein; K06990 bin=bin1_lowGC species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_50_b2_sep16_scaffold_4410_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1157..2101)
DNA (945bp) protein (315aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMS9_9FIRM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_50_b2_sep16_scaffold_4410_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2373..2606
DNA (234bp) protein (78aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_50_b2_sep16_scaffold_4410_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2814..4184
DNA (1371bp) protein (457aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III, delta subunit Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C767_DESTA
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_50_b2_sep16_scaffold_4410_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4181..4732
DNA (552bp) protein (184aa)
phospholipase Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B33518
phospholipase D/transphosphatidylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_50_b2_sep16_scaffold_4410_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4806..5120
DNA (315bp) protein (105aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_50_b2_sep16_scaffold_4410_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5158..5337
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_50_b2_sep16_scaffold_4410_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5647..6747
DNA (1101bp) protein (367aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase Tax=Thermincola potens (strain JR) RepID=D5X9D9_THEPJ
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_50_b2_sep16_scaffold_4410_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6775..7494)
DNA (720bp) protein (240aa)
Putative uncharacterized protein bin=GWC2_Syntrophobacterales_56_13 species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_50_b2_sep16_scaffold_4410_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7678..8139
DNA (462bp) protein (154aa)
MarR family transcriptional regulatory protein bin=GWD2_Deltaproteobacteria_55_8 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
MarR family transcriptional regulator
Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 10 items

View Taxonomy