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PLM3-1_50_b2_sep16_scaffold_5842

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b2_sep16_scaffold_5842_1
unknown

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comp(1..105)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3-1_50_b2_sep16_scaffold_5842_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(177..665)
DNA (489bp) protein (163aa)
ATP synthase subunit a bin=GWD2_Deltaproteobacteria_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ATP synthase f0 subcomplex a subunit
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_50_b2_sep16_scaffold_5842_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(673..909)
DNA (237bp) protein (79aa)
ATP synthase subunit a bin=GWD2_Deltaproteobacteria_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_50_b2_sep16_scaffold_5842_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(913..1290)
DNA (378bp) protein (126aa)
id=1803237 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_50_b2_sep16_scaffold_5842_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1253..1546)
DNA (294bp) protein (98aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_50_b2_sep16_scaffold_5842_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1580..2866)
DNA (1287bp) protein (429aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_50_b2_sep16_scaffold_5842_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3259..4566
DNA (1308bp) protein (436aa)
Chromosomal replication initiator protein DnaA bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
chromosomal replication initiation protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_50_b2_sep16_scaffold_5842_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4671..5186
DNA (516bp) protein (172aa)
DNA polymerase III subunit beta bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
DNA polymerase III subunit beta
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_50_b2_sep16_scaffold_5842_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5159..5761
DNA (603bp) protein (201aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_50_b2_sep16_scaffold_5842_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5798..6607)
DNA (810bp) protein (270aa)
putative isocitrate lyase/carboxyphosphonoenolpyruvate phosphonomutase (EC:4.1.3.1)
Uncharacterized protein Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4KRN1_9DELT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_50_b2_sep16_scaffold_5842_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6700..7059)
DNA (360bp) protein (120aa)
id=1803223 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_50_b2_sep16_scaffold_5842_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7098..7724)
DNA (627bp) protein (209aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55)
4,5-dihydroxyphthalate decarboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 12 items

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