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YM_S32_scaffold_0_chromo_pre_term.fasta_1460

Organism: YM_S32_TM7_50_20_curated

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 ASCG 9 / 38 MC: 1
Location: comp(1375903..1377123)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QCX2_CATAD similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 360.0
  • Bit_score: 380
  • Evalue 1.10e-102
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 360.0
  • Bit_score: 380
  • Evalue 3.00e-103
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 360.0
  • Bit_score: 380
  • Evalue 1.50e-102

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Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGGAAAACGATATATCTGCGAAGGCTCCTTTTCTGGATCCGCACGAAAGTGGCGCAGCGCTTAGCGACCTAGGTTCCACTTTCCTGGATGAAGCTTTAGAAGATGTCGCTGGGCATAGTGATGGAGTGGTTGTTGGTGTCGCTGGCGCCATCGCACTAGCCGAAGTAGATGCTTTTGCCGAAGAGGGTGAAGAAACGCCTGTATCTGTGGCGGGCGATCCGTCAGCTGACGATGGCTTGTGGATATCCGATCTAGTAGAACAGGAAGAGGACATGCCGGCTAACGATAGTCCAACCAGGGGTCGCAACGAAGGTGTGGTGTCAGCCGACCCAGTAAGAGATTATCTACGACAGATTGGTAAAGTCCCATTACTGAATGCCGAGCAAGAAGTTGATCTCGCAAAGCGGATCGAAGCTGGCCTGTATGCCGAGCACAAGCTCAATTCTGGCGAAAAGCTAAAACCTGAATTCCGCCGGGAACTGGGGATTATCGCCGAAGATGGTCGCAGGGCCAAGGATCATTTGGAGGAAGCAAATCTACGCCTGGTAGTGTCGTTAGCAAAACGATATACGGGCCGGGGTATGACACTTATGGATCTCATCCAGGAAGGAAATATTGGTCTGATCCGTGCAGTCGAAAAGTTTGATTATACTAAGGGCTTTAAGTTTTCAACCTACTCCACTTGGTGGATCCGCCAGAGCATCACGCGTGCGATGGCTGACCAGGCCCGAACTATTCGCGTTCCGGTACATGTAGCAGAGAGCTTGAGCAAGGTAAGACGCGCGCGCGAGACGCTGCAGCAGCAGATGGCCGACGACCCAACACCAGAGGGTATTGCTGCCGTCGTGGATATGCCACCGGAAAAAGTGACGGAGTTGCTTATACTTTCGCGAGATAATCTATCGTTCGCTGATCCGTGGGGTGAGGATCAGACGGTCGGCGACAATATTATGGAGGATGATGCAGCGTCCCCGGAAAATATCACTGCCCATGCGGTAATGGGCGAAGCTCTTGAGAAAGTTTTGTCCACGCTACCCGAGCAGCAGGCGTGGGTCTTGAGGTTGCGTTTTGGACTCGTAGATGGGCATGAGTATACTCTTGAATCGATTGCTAAGGTATACGGAGTTACTCGTGAGCGTATCCGCCAGATTCAGAACAGAGCCCTTGAGACACTAAAGGGTTCGCAAAAAGCTAGCCATTTATTGGACTTTCTCCGCTAG
PROTEIN sequence
Length: 407
MENDISAKAPFLDPHESGAALSDLGSTFLDEALEDVAGHSDGVVVGVAGAIALAEVDAFAEEGEETPVSVAGDPSADDGLWISDLVEQEEDMPANDSPTRGRNEGVVSADPVRDYLRQIGKVPLLNAEQEVDLAKRIEAGLYAEHKLNSGEKLKPEFRRELGIIAEDGRRAKDHLEEANLRLVVSLAKRYTGRGMTLMDLIQEGNIGLIRAVEKFDYTKGFKFSTYSTWWIRQSITRAMADQARTIRVPVHVAESLSKVRRARETLQQQMADDPTPEGIAAVVDMPPEKVTELLILSRDNLSFADPWGEDQTVGDNIMEDDAASPENITAHAVMGEALEKVLSTLPEQQAWVLRLRFGLVDGHEYTLESIAKVYGVTRERIRQIQNRALETLKGSQKASHLLDFLR*