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ACD22_24

Alias: ACD22_4327.10160.15

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD22_24_1

Not on your lists

comp(1..1572)
DNA (1572bp) protein (524aa)
resolvase
resolvase
Resolvase n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3ST80_NITWN (db=UNIREF evalue=7.0e-85 bit_score=318.0 identity=35.4 coverage=92.3664122137405)
coiled-coil (db=Coil db_id=coil from=349 to=370 evalue=NA)
ACD22_24_2

Not on your lists

comp(1787..2287)
DNA (501bp) protein (167aa)
1787..2287 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD99836.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_24_3

Not on your lists

comp(2355..2477)
DNA (123bp) protein (41aa)
2355..2477 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD99837.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_24_4

Not on your lists

comp(2474..2743)
DNA (270bp) protein (90aa)
2474..2743 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD99838.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_24_5

Not on your lists

comp(2785..3561)
DNA (777bp) protein (259aa)
2785..3561 - (rbs_motif=TATAAT rbs_spacer=14bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD99839.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_24_6

Not on your lists

comp(3616..4209)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RNX4_9RHOB (db=UNIREF evalue=6.0e-12 bit_score=73.9 identity=29.69 coverage=91.4141414141414)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD99840.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_24_7

Not on your lists

comp(4270..5085)
DNA (816bp) protein (272aa)
seg (db=Seg db_id=seg from=190 to=214)
transmembrane_regions (db=TMHMM db_id=tmhmm from=220 to=242)
transmembrane_regions (db=TMHMM db_id=tmhmm from=193 to=215)
transmembrane_regions (db=TMHMM db_id=tmhmm from=113 to=135)
ACD22_24_8

Not on your lists

5156..5377
DNA (222bp) protein (74aa)
Transcriptional regulator, Cro/CI family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AG33_9CLOT (db=UNIREF evalue=2.0e-08 bit_score=61.6 identity=45.0 coverage=79.7297297297297)
HTH_3 (db=HMMPfam db_id=PF01381 from=18 to=70 evalue=5.2e-16 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=13 to=72 evalue=8.8e-16)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=3 to=72 evalue=1.9e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
ACD22_24_9

Not on your lists

comp(5384..6205)
DNA (822bp) protein (274aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=242 to=264)
seg (db=Seg db_id=seg from=247 to=263)
Uncharacterized protein {ECO:0000313|EMBL:EKD99843.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_24_10

Not on your lists

6229..6723
DNA (495bp) protein (165aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=141 to=163)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=126)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=104)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD22_24_11

Not on your lists

comp(6804..6962)
DNA (159bp) protein (53aa)
6804..6962 - (rbs_motif=TAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD99845.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_24_12

Not on your lists

7102..7314
DNA (213bp) protein (71aa)
seg (db=Seg db_id=seg from=39 to=52)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD99846.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_24_13

Not on your lists

7330..7716
DNA (387bp) protein (129aa)
7330..7716 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD99847.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_24_14

Not on your lists

7872..9035
DNA (1164bp) protein (388aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NR39_9DELT (db=UNIREF evalue=4.0e-104 bit_score=381.0 identity=53.16 coverage=96.9072164948454)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=11 to=174 evalue=4.8e-13)
ACD22_24_15

Not on your lists

9446..9655
DNA (210bp) protein (70aa)
9446..9655 + (rbs_motif=TATAAT rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD99849.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD22_24_16

Not on your lists

9652..10011
DNA (360bp) protein (120aa)
coiled-coil (db=Coil db_id=coil from=82 to=110 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=65)
Uncharacterized protein {ECO:0000313|EMBL:EKD99850.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_24_17
unknown

Not on your lists

10135..10197
DNA (63bp) protein (21aa)
10135..10197 + (rbs_motif=TAA rbs_spacer=12bp)
Displaying 17 items

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