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ACD24_84

Alias: ACD24_63706.5035.14

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD24_84_1
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(3..140)
DNA (138bp) protein (46aa)
seg (db=Seg db_id=seg from=14 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Uncharacterized protein (Fragment) Tax=RBG_16_WWE3_37_10_curated
ACD24_84_2
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(309..647)
DNA (339bp) protein (113aa)
309..647 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD24_84_3

Not on your lists

comp(700..1020)
DNA (321bp) protein (107aa)
700..1020 - (rbs_motif=TAGTA rbs_spacer=14bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD95523.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD24_84_4
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(1312..1710)
DNA (399bp) protein (133aa)
PIN domain protein n=2 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DUJ6_9BACT (db=UNIREF evalue=4.0e-11 bit_score=70.5 identity=34.92 coverage=91.7293233082707)
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=130 evalue=2.1e-21)
PIN (db=HMMPfam db_id=PF01850 from=6 to=127 evalue=9.2e-16 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
putative nucleic acid-binding protein, contains PIN domain Tax=RBG_16_WWE3_37_10_curated
ACD24_84_5
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(1703..1981)
DNA (279bp) protein (93aa)
1703..1981 - (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD24_84_6
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(2058..2468)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU56_9AQUI (db=UNIREF evalue=4.0e-09 bit_score=63.9 identity=29.32 coverage=94.1605839416058)
seg (db=Seg db_id=seg from=23 to=34)
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=132 evalue=2.1e-21)
PIN (db=HMMPfam db_id=PF01850 from=3 to=127 evalue=1.2e-11 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
ACD24_84_7
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(2468..2698)
DNA (231bp) protein (77aa)
2468..2698 - (rbs_motif=ATAAT rbs_spacer=7bp)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD24_84_8
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(2855..3229)
DNA (375bp) protein (125aa)
nucleotide-binding protein
PIN domain-like (db=superfamily db_id=SSF88723 from=2 to=124 evalue=5.1e-24)
PIN (db=HMMPfam db_id=PF01850 from=1 to=123 evalue=5.9e-19 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
nucleic acid-binding protein alias=ACD24_63706.5035.14G0008,ACD24_63706.5035.14_8,ACD24_C00084G00008 id=28032 tax=ACD24 species=Thermococcus barophilus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota organism_group=WWE3 organism_desc=WWE3
ACD24_84_9
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(3234..3521)
DNA (288bp) protein (96aa)
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=2 to=52 evalue=4.8e-06)
AbrB/MazE/MraZ-like Tax=RBG_16_WWE3_37_10_curated
ACD24_84_10
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(3593..4597)
DNA (1005bp) protein (335aa)
PIN/TRAM protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
seg (db=Seg db_id=seg from=20 to=34)
seg (db=Seg db_id=seg from=98 to=112)
ACD24_84_11

Not on your lists

4610..4990
DNA (381bp) protein (127aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=122)
Uncharacterized protein {ECO:0000313|EMBL:EKD95519.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD24_84_12

Not on your lists

4998..5072
DNA (75bp) protein (25aa)
4998..5072 + (rbs_motif=TAAT rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD95520.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 12 items

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