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ACD24_139

Alias: ACD24_18500.6365.18

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD24_139_1

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3..1457
DNA (1455bp) protein (485aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
coiled-coil (db=Coil db_id=coil from=142 to=163 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=341 to=363)
ACD24_139_2

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1454..2371
DNA (918bp) protein (306aa)
Protein translocase subunit SecF
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=158 to=180)
transmembrane_regions (db=TMHMM db_id=tmhmm from=190 to=211)
ACD24_139_3
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

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2371..4032
DNA (1662bp) protein (554aa)
hypothetical protein
seg (db=Seg db_id=seg from=280 to=296)
coiled-coil (db=Coil db_id=coil from=289 to=310 evalue=NA)
recJ: single-stranded-DNA-specific exonuclea (db=HMMTigr db_id=TIGR00644 from=15 to=545 evalue=2.3e-133 interpro_id=IPR004610 interpro_description=Bacterial RecJ exonuclease GO=Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Molecular Function: 5'-3' exonuclease activity (GO:0008409))
ACD24_139_4

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comp(4100..4672)
DNA (573bp) protein (191aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=118)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=89)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
Uncharacterized protein {ECO:0000313|EMBL:EKD96261.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD24_139_5

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5328..5537
DNA (210bp) protein (70aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
ASPARTYL/LYSYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR22594 from=1 to=69 evalue=1.3e-27 interpro_id=IPR018150 interpro_description=Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:00064
ASPARTYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR22594:SF5 from=1 to=69 evalue=1.3e-27 interpro_id=IPR018153 interpro_description=Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type, C-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aspartate-tRNA ligase activity (GO:0004815), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: aspartyl-tRNA aminoacylati
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=1 to=69 evalue=2.0e-17)
ACD24_139_6
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

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5534..5911
DNA (378bp) protein (126aa)
YbaK/prolyl-tRNA synthetase associated domain-containing protein
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R493_PIRSD (db=UNIREF evalue=6.0e-15 bit_score=83.2 identity=43.64 coverage=86.5079365079365)
seg (db=Seg db_id=seg from=63 to=75)
YbaK/ProRS associated domain (db=superfamily db_id=SSF55826 from=1 to=103 evalue=4.6e-27 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
ACD24_139_7
R_WWE3_37_15, WWE3, Bacteria

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5908..6099
DNA (192bp) protein (64aa)
YbaK/ProRS associated domain (db=superfamily db_id=SSF55826 from=1 to=63 evalue=9.7e-07 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
YbaK (db=HMMPfam db_id=PF04073 from=1 to=53 evalue=0.00018 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
YbaK/prolyl-tRNA synthetase associated domain-containing protein Tax=RIFCSPLOWO2_01_FULL_WWE3_37_15_curated
ACD24_139_8
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

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6128..6403
DNA (276bp) protein (92aa)
seg (db=Seg db_id=seg from=39 to=52)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=54)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=RBG_16_WWE3_37_10_curated
Displaying 8 items

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