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ACD24_157

Alias: ACD24_14914.7709.19

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD24_157_1

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512..931
DNA (420bp) protein (140aa)
Glycoside hydrolase family 18
Glycosyl hydrolase, family 18 n=1 Tax=uncultured marine bacterium 159 RepID=Q6SHW7_9BACT (db=UNIREF evalue=3.0e-13 bit_score=77.4 identity=34.81 coverage=87.8571428571429)
CHITINASE (db=HMMPanther db_id=PTHR11177 from=10 to=131 evalue=4.1e-14)
CHITINASE (db=HMMPanther db_id=PTHR11177:SF6 from=10 to=131 evalue=4.1e-14)
chitinase group Jill Banfield (11/15/12)
ACD24_157_2

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963..1679
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UIK3_9FLAO (db=UNIREF evalue=2.0e-17 bit_score=92.4 identity=36.99 coverage=58.5774058577406)
Uncharacterized protein {ECO:0000313|EMBL:EKD96386.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD24_157_3

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1918..2466
DNA (549bp) protein (183aa)
hypothetical protein
Signal peptidase I n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEI2_9ACTN (db=UNIREF evalue=2.0e-25 bit_score=118.0 identity=42.22 coverage=72.1311475409836)
seg (db=Seg db_id=seg from=3 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
ACD24_157_4
R_WWE3_37_15, WWE3, Bacteria

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comp(2489..2686)
DNA (198bp) protein (66aa)
50S ribosomal protein L27
50S ribosomal protein L27 n=2 Tax=Oribacterium RepID=D4CLI0_9FIRM (db=UNIREF evalue=2.0e-11 bit_score=71.2 identity=52.31 coverage=96.969696969697)
RIBOSOMAL_L27 (db=PatternScan db_id=PS00831 from=14 to=28 evalue=0.0 interpro_id=IPR018261 interpro_description=Ribosomal protein L27, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L27 (db=HMMPfam db_id=PF01016 from=1 to=61 evalue=3.6e-23 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD24_157_5
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

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comp(3306..3611)
DNA (306bp) protein (102aa)
hypothetical protein
hypothetical protein alias=ACD24_C00157G00005,ACD24_14914.7709.19G0005,ACD24_14914.7709.19_5 id=28458 tax=ACD24 species=Eubacterium siraeum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3 organism_desc=WWE3
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD24_157_6
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

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comp(3612..4949)
DNA (1338bp) protein (446aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=289 to=311)
seg (db=Seg db_id=seg from=2 to=13)
cell envelope-related transcriptional attenuator Tax=RBG_16_WWE3_37_10_curated
hypothetical protein
ACD24_157_7
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

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comp(5012..6061)
DNA (1050bp) protein (350aa)
mrdB; cell wall shape-determining protein
Rod shape-determining protein RodA n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HNZ7_9FIRM (db=UNIREF evalue=1.0e-41 bit_score=174.0 identity=41.64 coverage=76.2857142857143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=116)
transmembrane_regions (db=TMHMM db_id=tmhmm from=170 to=189)
ACD24_157_8
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

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comp(6073..6627)
DNA (555bp) protein (185aa)
Cob(I)alamin adenosyltransferase
coiled-coil (db=Coil db_id=coil from=85 to=106 evalue=NA)
1,3-PROPANEDIOL DEHYDROGENASE-RELATED (db=HMMPanther db_id=PTHR12213 from=1 to=184 evalue=8.7e-49 interpro_id=IPR017858 interpro_description=Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: cob(I)yrinic acid a,c-diamide adenosyltransferase activity (GO:0008817), Biological Process: cobalamin biosynthetic process (GO:0009236))
Cob_adeno_trans (db=HMMPfam db_id=PF01923 from=4 to=172 evalue=1.3e-48 interpro_id=IPR002779 interpro_description=Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: cob(I)yrinic acid a,c-diamide adenosyltransferase activity (GO:0008817), Biological Process: cobalamin biosynthetic process (GO:0009236))
ACD24_157_9
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

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comp(6662..7747)
DNA (1086bp) protein (362aa)
hypothetical protein
seg (db=Seg db_id=seg from=169 to=181)
coiled-coil (db=Coil db_id=coil from=167 to=188 evalue=NA)
RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN (db=HMMPanther db_id=PTHR11573 from=1 to=180 evalue=4.0e-42 interpro_id=IPR000788 interpro_description=Ribonucleotide reductase large subunit, C-terminal GO=Molecular Function: ribonucleoside-diphosphate reductase activity (GO:0004748), Cellular Component: ribonucleoside-diphosphate reductase complex (GO:0005971), Biological Process: DNA replication (GO:0006260))
Displaying 9 items

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