ggKbase home page

08E140C01_scaffold_1555_3

Organism: BJP_08E140C01_Hor_218_2013_Falkowbacteria_43_7

partial RP 46 / 55 MC: 1 BSCG 40 / 51 ASCG 9 / 38 MC: 1
Location: comp(2216..3535)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2110492 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 444.0
  • Bit_score: 602
  • Evalue 4.20e-169
  • rbh
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 432.0
  • Bit_score: 376
  • Evalue 1.40e-101
Tax=BJP_08E140C01_OD1_43_7 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 439.0
  • Bit_score: 844
  • Evalue 8.90e-242

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_OD1_43_7 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGGCTAAAAGCAAAAATCACAACTCAAAGAAGCCGGTTTCCAAGAAAGCGCCGCTGAAAAAGCAGGTCGCCAAGAAACCAGCCACTAAAACCAATGGACACGCCAATGGTCGTCCTAAGGTAGTTGCTAAAAAGCCGGTTGCAAAGAAGCAGGAGGTAAAGAAGGGTGCACCTAAGGCTGCAAAGAAACCAGTGCACAAGGAAAAGGCTCCAGAGAAGCCAGCTAGAGTTGTGGTACAGCCTACCGAAGAGCAGTTGCAAAAGTTGCTCGCTAAAGGACGAACACGAAGTTTTGTGACCGAGACCGAACTATTATACTTGTTCCCTGAAGTGGAAGAGTATGTTTACGAATATGATGTTTTTTTAGGCGAGTTATCCAAGAACGGTATTCGCATCGCGGAAGACTCTGGTCGCATCCTAGATGTGCAAGAAAAAAATCAACACATGACCTCAGCCAAGGCCGCCGCTGCCGTTACCTTCGACCTATCAAAACTGAGCGCAGATTCTATTCAGATGTATTTAAAAGAAATCGGCAAAGTGCCACTCCTTACCTCTGAAGAAGAAGTTGAGCTCGCAAAACGCAAAGAGAAGGGTGACAAGGAAGCTGAAAAGAAAATTATCGAAGCTAACCTGCGCTTAGTTGTTTCTATTGCTAAGAAGTTTGCCGGTGCTAAAGGCCTAAGCTTGCTCGATCTTATCCAAGAAGGAAATATTGGTTTGTTTCGTGCCGTTGAAAAGTTTGAGTTCCGCAAGGGCTTTAAGTTCTCGACCTACGCAACTTGGTGGATAAGACAGGCAATCACACGTGCTTTAGCTGATCAAAGCCGCACCATCCGTATTCCTGTGCACATGGTGGAAACAATTAACAAGTTTCAGCAAGTGCAACGCACCCTTATTCAAGAATTAGGACGCGAACCGTTAGCGGAAGAAATTGCTTCAGAAATGGGAGAGGATATTGAGAAGGTGAGATATATTATCAAAATCTCACAAGATACGATTTCACTTGAAACTAGTATCGGTGACGATGAAGAAGACTCAACTTTGGAAGATTTCATTGAGGATGTGAAGAATGTGACCCCAGATAGAGCGGCGGCCTTGCAGCTCTTGCGTGATTACGTTAAAAATATTGTCGCTCAACTATCACCGAGAGAGCAAAAAATACTAGAAATGCGCTTCGGGCTCACCGATGGCGTTGCTCACACCTTAGAAGAAGTGGGACAGGAATTTGAGGTTACCCGTGAACGTATTCGTCAAATTGAGTCAAAAGCTTTAGAGAAAATCCGGAAACTCAAGGGGCTGGAAAAATTGAGGGATTACTAA
PROTEIN sequence
Length: 440
MAKSKNHNSKKPVSKKAPLKKQVAKKPATKTNGHANGRPKVVAKKPVAKKQEVKKGAPKAAKKPVHKEKAPEKPARVVVQPTEEQLQKLLAKGRTRSFVTETELLYLFPEVEEYVYEYDVFLGELSKNGIRIAEDSGRILDVQEKNQHMTSAKAAAAVTFDLSKLSADSIQMYLKEIGKVPLLTSEEEVELAKRKEKGDKEAEKKIIEANLRLVVSIAKKFAGAKGLSLLDLIQEGNIGLFRAVEKFEFRKGFKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINKFQQVQRTLIQELGREPLAEEIASEMGEDIEKVRYIIKISQDTISLETSIGDDEEDSTLEDFIEDVKNVTPDRAAALQLLRDYVKNIVAQLSPREQKILEMRFGLTDGVAHTLEEVGQEFEVTRERIRQIESKALEKIRKLKGLEKLRDY*