ggKbase home page

08E140C01_scaffold_1555

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_1555_1
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

3..1580
DNA (1578bp) protein (526aa)
Resolvase, N terminal domain family n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J816_9RHOB id=13222 bin=ACD18 species=Octadecabacter antarcticus genus=Octadecabacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_trna_1
unknown

Not on your lists

comp(1478..1549)
DNA (72bp)
transferRNA
08E140C01_scaffold_1555_2
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(1719..2102)
DNA (384bp) protein (128aa)
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_3
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(2216..3535)
DNA (1320bp) protein (440aa)
RNA polymerase sigma factor id=2110492 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
sigma-70 family RNA polymerase sigma factor
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_4
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(3544..5346)
DNA (1803bp) protein (601aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037A80A8 rbh
DNA primase
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_5
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(5351..5794)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FJ30_9BACT
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_6
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(5811..6284)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NCQ9_KITSK
hypothetical protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_7
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(6288..7196)
DNA (909bp) protein (303aa)
D-alanyl-D-alanine carboxypeptidase id=2188492 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_8
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(7190..7741)
DNA (552bp) protein (184aa)
Segregation and condensation protein B id=2188495 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
scpB; segregation and condensation protein B
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_9
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(7752..8468)
DNA (717bp) protein (239aa)
Segregation and condensation protein A id=2188498 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_10
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(8471..9517)
DNA (1047bp) protein (349aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K2A2X5_9BACT rbh
hypothetical protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_11
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(9533..10921)
DNA (1389bp) protein (463aa)
Asparagine--tRNA ligase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=SYN_ALKOO
asnC; asparaginyl-tRNA synthetase
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_12
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(10931..12235)
DNA (1305bp) protein (435aa)
tcu:Tcur_2124 aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=725056 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3 rbh
hypothetical protein
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_13
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(12372..13106)
DNA (735bp) protein (245aa)
DNA repair protein RecO id=1797465 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
DNA repair protein RecO
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_14
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(13116..13508)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003620546
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_15
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(13509..14342)
DNA (834bp) protein (278aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=1797488 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_16
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

comp(14345..14641)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000360C58F
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_17
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(14736..16007)
DNA (1272bp) protein (424aa)
Protein translocase subunit SecY id=1797347 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
preprotein translocase subunit SecY
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_18
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(16048..16464)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037DA4B4
rplO; 50S ribosomal protein L15
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_19
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(16491..17171)
DNA (681bp) protein (227aa)
30S ribosomal protein S5, partial n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037FA3E9
rpsE; 30S ribosomal subunit protein S5
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_20
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(17197..17556)
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037F2188
rplR; 50S ribosomal protein L18
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_21
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(17577..18116)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=RL6_GEOLS
rplF; 50S ribosomal protein L6
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_22
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(18173..18583)
DNA (411bp) protein (137aa)
30S ribosomal protein S8 n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037D69F3
30S ribosomal protein S8
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_23
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(18621..18806)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003823219
30S ribosomal protein S14
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_24
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(18820..19365)
DNA (546bp) protein (182aa)
50S ribosomal protein L5 id=1797359 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L5
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_25
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(19377..19697)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036D6549
rplX; 50S ribosomal protein L24
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_26
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(19722..20096)
DNA (375bp) protein (125aa)
LSU ribosomal protein L14p (L23e) id=1797363 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
rplN; ribosomal protein L14
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_27
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(20107..20382)
DNA (276bp) protein (92aa)
30S ribosomal protein S17 n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037404FB
30S ribosomal protein S17
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_28
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(20394..20573)
DNA (180bp) protein (60aa)
50S ribosomal protein L29 id=1797367 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=BJP_08E140C01_OD1_43_7
08E140C01_scaffold_1555_29
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(20614..21018)
DNA (405bp) protein (135aa)
50S ribosomal protein L16 n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000373C709
50S ribosomal protein L16
Tax=BJP_08E140C01_OD1_43_7
Displaying items 1-30 of 33 in total

View Taxonomy