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gwc1_scaffold_3782

Alias: GWC1_OP11_39_12_19

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_3782_1
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

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comp(1..129)
DNA (129bp) protein (43aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR02784.1}; Flags: Fragment;; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_12.;"
gwc1_scaffold_3782_2
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

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comp(201..521)
DNA (321bp) protein (107aa)
Membrane protein {ECO:0000313|EMBL:KKR02785.1}; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_12.;"
transmembrane_regions 45..62 alias=ACD9_19178.2347.6G0001,ACD9_19178.2347.6_1,ACD9_C00094G00001 id=138126 tax=ACD9 species=OD1-i genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3782_3
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

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comp(551..1288)
DNA (738bp) protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR02786.1}; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_12.;"
hypothetical protein
hypothetical protein Lbro5_00515
gwc1_scaffold_3782_4
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

Not on your lists

comp(1398..1640)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR02787.1}; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_12.;"
hypothetical protein
hypothetical protein; K07461 putative endonuclease alias=ACD12_C00094G00005,ACD12_16721.2072.5G0005,ACD12_16721.2072.5_5 id=4373 tax=ACD12 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres organism_group=OP11 organism_desc=
gwc1_scaffold_3782_5
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

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comp(1713..2297)
DNA (585bp) protein (195aa)
Micrococcal nuclease-like protein nuclease {ECO:0000313|EMBL:KKR02788.1}; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_12.;"
nuclease
Micrococcal nuclease-like nuclease
gwc1_scaffold_3782_6
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

Not on your lists

comp(2383..3366)
DNA (984bp) protein (328aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR02789.1}; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_12.;"
filamentation induced by cAMP protein fic
hypothetical protein alias=ACD50_C00180G00003,ACD50_1663.3863.4G0003,ACD50_1663.3863.4_3 id=72777 tax=ACD50 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
gwc1_scaffold_3782_7
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

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comp(3437..3931)
DNA (495bp) protein (165aa)
HhH-GPD family protein, A/G-specific adenine glycosylase {ECO:0000313|EMBL:KKR02790.1}; EC=3.2.2.- {ECO:0000313|EMBL:KKR02790.1};; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenom
HhH-GPD family protein; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] alias=ACD9_19178.2347.6G0004,ACD9_19178.2347.6_4,ACD9_C00094G00004 id=138128 tax=ACD9 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i
HhH-GPD family protein
gwc1_scaffold_3782_8
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

Not on your lists

comp(3906..4133)
DNA (228bp) protein (76aa)
HhH-GPD family protein, A/G-specific adenine glycosylase {ECO:0000313|EMBL:KKR02791.1}; EC=3.2.2.- {ECO:0000313|EMBL:KKR02791.1};; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenom
HhH-GPD family protein; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] alias=ACD9_19178.2347.6G0004,ACD9_19178.2347.6_4,ACD9_C00094G00004 id=138128 tax=ACD9 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
gwc1_scaffold_3782_9
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

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comp(4133..4885)
DNA (753bp) protein (251aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR02792.1}; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_12.;"
gwc1_scaffold_3782_10
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

Not on your lists

comp(4956..5297)
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR02793.1}; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_12.;"
gwc1_scaffold_3782_11
GWB1_OP11_40_9_partial, Microgenomates, Bacteria

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comp(5299..5682)
DNA (384bp) protein (128aa)
Tax=GWB1_OP11_40_9_partial
gwc1_scaffold_3782_12
GWB1_OP11_40_9_partial, Microgenomates, Bacteria

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comp(5679..6203)
DNA (525bp) protein (175aa)
RNA polymerase sigma factor n=1 Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=Q9KG50_BACHD
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=GWB1_OP11_40_9_partial
ECF subfamily RNA polymerase sigma-24 subunit
gwc1_scaffold_3782_13
GWB1_OP11_40_9_partial, Microgenomates, Bacteria

Not on your lists

6232..7095
DNA (864bp) protein (288aa)
GTPase Era {ECO:0000313|EMBL:KKR78653.1}; TaxID=1618504 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_40_9.;"
era; GTP-binding protein era
GTP-binding protein Era alias=gwa2_scaffold_993_152 id=5085327 tax=GWA2_OP11 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=RuBisCO project
gwc1_scaffold_3782_14
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

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comp(7098..8486)
DNA (1389bp) protein (463aa)
Glutamyl-tRNA synthetase, glutamyl-tRNA synthetase {ECO:0000313|EMBL:KKR02797.1}; EC=6.1.1.17 {ECO:0000313|EMBL:KKR02797.1};; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates
glutamyl- and glutaminyl-tRNA synthetase (EC:6.1.1.17 6.1.1.24)
glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] alias=gwa2_scaffold_993_150 id=5085325 tax=GWA2_OP11 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_desc=RuBisCO project
gwc1_scaffold_3782_15
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

Not on your lists

8525..9523
DNA (999bp) protein (333aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR02798.1}; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_12.;"
hypothetical protein alias=ACD48_50203.3471.5G0004,ACD48_50203.3471.5_4,ACD48_C00173G00004 id=67757 tax=ACD48 species=OP11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OP11 organism_group=OP11 organism_desc=OP11
gwc1_scaffold_3782_16
GWB1_OP11_40_9_partial, Microgenomates, Bacteria

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comp(9527..10495)
DNA (969bp) protein (323aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] alias=ACD48_50203.3471.5G0002,ACD48_50203.3471.5_2,ACD48_C00173G00002 id=67760 tax=ACD48 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR79281.1}; TaxID=1618504 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_40_9.;"
gwc1_scaffold_3782_17
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

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comp(10501..12324)
DNA (1824bp) protein (608aa)
Aspartyl-tRNA synthetase, aspartyl-tRNA synthetase {ECO:0000313|EMBL:KKR02800.1}; EC=6.1.1.12 {ECO:0000313|EMBL:KKR02800.1};; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] alias=ACD48_377381.2291.7G0001,ACD48_377381.2291.7_1,ACD48_C00011G00001 id=66726 tax=ACD48 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=OP11 organism_desc=OP11
gwc1_scaffold_3782_18
GWB1_OP11_40_9_partial, Microgenomates, Bacteria

Not on your lists

comp(12377..14017)
DNA (1641bp) protein (547aa)
toc:Toce_1366 single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] alias=ACD48_C00295G00002,ACD48_144568.4612.5G0002,ACD48_144568.4612.5_2 id=68357 tax=ACD48 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OP11 organism_desc=OP11
Single-stranded-DNA-specific exonuclease recJ Tax=GWB1_OP11_40_9_partial
single-stranded-DNA-specific exonuclease RecJ
gwc1_scaffold_3782_19
GWB1_OP11_40_9_partial, Microgenomates, Bacteria

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14050..15423
DNA (1374bp) protein (458aa)
tRNA adenylyl-/cytidylyl-transferase (Fragment) Tax=GWB1_OP11_40_9_partial
poly A polymerase head domain protein
tRNA adenylyl-/cytidylyl-transferase (Fragment)
gwc1_scaffold_3782_20
GWB1_OP11_40_9_partial, Microgenomates, Bacteria

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comp(15420..16301)
DNA (882bp) protein (294aa)
SecF protein {ECO:0000313|EMBL:KKR79285.1}; TaxID=1618504 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_40_9.;"
Protein translocase subunit SecF
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF alias=ACD48_C00295G00004,ACD48_144568.4612.5G0004,ACD48_144568.4612.5_4 id=68359 tax=ACD48 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
gwc1_scaffold_3782_21
GWB1_OP11_40_9_partial, Microgenomates, Bacteria

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comp(16305..17663)
DNA (1359bp) protein (453aa)
Protein-export membrane protein SecD n=1 Tax=Megasphaera genomosp. type_1 str. 28L RepID=D3LT24_9FIRM alias=ACD40_53707.20821.13G0019,ACD40_53707.20821.13_19,ACD40_C00044G00019 id=51798 tax=ACD40 species=Megasphaera genomosp. type_1 genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes organism_group=OP11 organism_desc=OP11
Preprotein translocase subunit SecD Tax=GWB1_OP11_40_9_partial
hypothetical protein
gwc1_scaffold_3782_22
GWB1_OP11_40_9_partial, Microgenomates, Bacteria

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comp(17673..18212)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9G3_9ARCH alias=ACD48_417720.3977.5G0003,ACD48_417720.3977.5_3,ACD48_C00035G00003 id=66890 tax=ACD48 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=OP11
Transcriptional regulator Tax=GWB1_OP11_40_9_partial
Transcriptional regulator
gwc1_scaffold_3782_23
GWB1_OP11_40_9_partial, Microgenomates, Bacteria

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comp(18279..18626)
DNA (348bp) protein (116aa)
Putative uncharacterized protein Tax=GWB1_OP11_40_9_partial
hypothetical protein
hypothetical protein alias=ACD48_417720.3977.5_4,ACD48_417720.3977.5G0004,ACD48_C00035G00004 id=66884 tax=ACD48 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
Displaying 23 items

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