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ACD28_81

Alias: ACD28_53270.8782.10

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_81_1

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3..1406
DNA (1404bp) protein (468aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=134 to=156)
transmembrane_regions (db=TMHMM db_id=tmhmm from=165 to=187)
transmembrane_regions (db=TMHMM db_id=tmhmm from=191 to=213)
transmembrane_regions (db=TMHMM db_id=tmhmm from=233 to=252)
ACD28_81_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(1454..2008)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DFZ3_9EURY (db=UNIREF evalue=1.0e-32 bit_score=142.0 identity=36.96 coverage=97.2972972972973)
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=3 to=184 evalue=9.1e-37)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=1 to=181 evalue=2.0e-28)
ACD28_81_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(2023..2904)
DNA (882bp) protein (294aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
seg (db=Seg db_id=seg from=225 to=239)
Pyrroline-5-carboxylate reductase (db=HMMPIR db_id=PIRSF000193 from=25 to=293 evalue=6.2e-67 interpro_id=IPR000304 interpro_description=Delta 1-pyrroline-5-carboxylate reductase GO=Molecular Function: pyrroline-5-carboxylate reductase activity (GO:0004735), Biological Process: proline biosynthetic process (GO:0006561), Biological Process: oxidation reduction (GO:0055114))
proC: pyrroline-5-carboxylate reductase (db=HMMTigr db_id=TIGR00112 from=28 to=292 evalue=6.1e-61 interpro_id=IPR000304 interpro_description=Delta 1-pyrroline-5-carboxylate reductase GO=Molecular Function: pyrroline-5-carboxylate reductase activity (GO:0004735), Biological Process: proline biosynthetic process (GO:0006561), Biological Process: oxidation reduction (GO:0055114))
ACD28_81_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(2861..3676)
DNA (816bp) protein (272aa)
Phage integrase family protein
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=95 to=271 evalue=1.2e-50 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=101 to=269 evalue=1.0e-46 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
Phage_integrase (db=HMMPfam db_id=PF00589 from=106 to=262 evalue=4.9e-45 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD28_81_5

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4075..4677
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M725_9BACT (db=UNIREF evalue=1.0e-32 bit_score=142.0 identity=52.94 coverage=73.134328358209)
hypothetical protein
T5orf172 (db=HMMPfam db_id=PF10544 from=13 to=88 evalue=5.1e-07 interpro_id=IPR018306 interpro_description=Putative helicase A859L)
Uncharacterized protein {ECO:0000313|EMBL:EKD92827.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_81_6

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4686..5642
DNA (957bp) protein (319aa)
DNA adenine methylase
DNA adenine methylase
DNA adenine methylase n=1 Tax=Hydrogenobacter thermophilus TK-6 RepID=D3DJW3_HYDTT (db=UNIREF evalue=1.0e-79 bit_score=300.0 identity=53.05 coverage=84.012539184953)
coiled-coil (db=Coil db_id=coil from=194 to=222 evalue=NA)
RMS related? Jill Banfield (11/15/12)
ACD28_81_7

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5647..6504
DNA (858bp) protein (286aa)
Type II restriction endonuclease BstXII
Type II restriction endonuclease, MboI type (db=HMMPIR db_id=PIRSF016080 from=1 to=285 evalue=1.3e-115 interpro_id=IPR021191 interpro_description=Restriction endonuclease, type II, DpmII GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: Type II site-specific deoxyribonuclease activity (GO:0009036), Biological Process: DNA restriction-modification system (GO:0009307))
DpnII (db=HMMPfam db_id=PF04556 from=4 to=283 evalue=9.6e-98 interpro_id=IPR007637 interpro_description=Restriction endonuclease, type II, DpmII-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: Type II site-specific deoxyribonuclease activity (GO:0009036), Biological Process: DNA restriction-modification system (GO:0009307))
Uncharacterized protein {ECO:0000313|EMBL:EKD92829.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_81_8

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6509..7255
DNA (747bp) protein (249aa)
RNA methylase
Putative DNA methylase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LX36_9FIRM (db=UNIREF evalue=7.0e-78 bit_score=293.0 identity=59.02 coverage=96.7871485943775)
coiled-coil (db=Coil db_id=coil from=85 to=106 evalue=NA)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=3 to=98 evalue=1.6e-17)
ACD28_81_9

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7252..8703
DNA (1452bp) protein (484aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SKI6_9RHIZ (db=UNIREF evalue=6.0e-21 bit_score=106.0 identity=26.08 coverage=96.4876033057851)
seg (db=Seg db_id=seg from=311 to=323)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=26 to=239 evalue=2.7e-14)
Displaying 9 items

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