Alias: ACD28_13376.27830.12
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD28_95_1
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(3..209)
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DIHYDROOROTASE_1 (db=PatternScan db_id=PS00482 from=49 to=57 evalue=0.0 interpro_id=IPR002195 interpro_description=Dihydroorotase, conserved site GO=Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides (GO:0016812))
DIHYDROOROTASE (db=HMMPanther db_id=PTHR11647:SF5 from=35 to=68 evalue=3.2e-12)
AMINOHYDROLASE (db=HMMPanther db_id=PTHR11647 from=35 to=68 evalue=3.2e-12)
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=45 to=69 evalue=1.4e-06)
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ACD28_95_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
409..1782
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seg (db=Seg db_id=seg from=301 to=310)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=18 to=451 evalue=3.3e-23 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
Aminotran_1_2 (db=HMMPfam db_id=PF00155 from=147 to=442 evalue=1.4e-13 interpro_id=IPR004839 interpro_description=Aminotransferase, class I/classII GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: transferase activity, transferring nitrogenous groups (GO:0016769), Molecular Function: pyridoxal phosphate binding (GO:0030170))
no description (db=Gene3D db_id=G3DSA:3.40.640.10 from=152 to=334 evalue=2.3e-07 interpro_id=IPR015421 interpro_description=Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: pyridoxal phosphate binding (GO:0030170))
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ACD28_95_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
1817..3490
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Glutamine synthetase/guanido kinase (db=superfamily db_id=SSF55931 from=9 to=495 evalue=2.7e-13)
hypothetical protein Tax=GWA2_PER_44_7
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ACD28_95_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
3511..5145
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peptidase M20; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] (db=KEGG evalue=5.0e-09 bit_score=66.6 identity=31.41 coverage=25.6880733944954)
seg (db=Seg db_id=seg from=312 to=319)
ARGE_DAPE_CPG2_1 (db=PatternScan db_id=PS00758 from=103 to=112 evalue=0.0 interpro_id=IPR001261 interpro_description=ArgE/DapE/ACY1/CPG2/YscS, conserved site GO=Biological Process: proteolysis (GO:0006508), Molecular Function: metallopeptidase activity (GO:0008237))
Zn-dependent exopeptidases (db=superfamily db_id=SSF53187 from=13 to=543 evalue=9.6e-29)
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ACD28_95_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(5154..6089)
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aspartate carbamoyltransferase catalytic subunit
Aspartate carbamoyltransferase n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0XXN3_9GAMM (db=UNIREF evalue=1.0e-70 bit_score=270.0 identity=44.92 coverage=94.551282051282)
seg (db=Seg db_id=seg from=297 to=308)
CARBAMOYLTRANSFERASE (db=PatternScan db_id=PS00097 from=51 to=58 evalue=0.0 interpro_id=IPR006130 interpro_description=Aspartate/ornithine carbamoyltransferase GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Molecular Function: amino acid binding (GO:0016597), Molecular Function: carboxyl- or carbamoyltransferase activity (GO:0016743))
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ACD28_95_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
6202..7290
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carbamoyl phosphate synthase small subunit
seg (db=Seg db_id=seg from=3 to=14)
CARBAMOYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11405 from=10 to=361 evalue=6.1e-188)
CARBAMOYL-PHOSPHATE SYNTHASE LARGE CHAIN (db=HMMPanther db_id=PTHR11405:SF3 from=10 to=361 evalue=6.1e-188)
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ACD28_95_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
7305..8567
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beta-1,4-xylanase
Ig-like, group 2 n=3 Tax=Clostridium thermocellum RepID=A3DBG8_CLOTH (db=UNIREF evalue=2.0e-29 bit_score=133.0 identity=38.07 coverage=40.855106888361)
seg (db=Seg db_id=seg from=9 to=32)
seg (db=Seg db_id=seg from=222 to=233)
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ACD28_95_8
uncultured bacterium, Bacteria
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Not on your lists |
8597..10972
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dinG; bifunctional ATP-dependent DNA helicase DinG / DnaQ family exonuclease (EC:3.6.4.12)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=4 to=210 evalue=2.1e-47 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=7 to=170 evalue=8.9e-40)
no description (db=HMMSmart db_id=SM00479 from=6 to=168 evalue=1.4e-37 interpro_id=IPR006055 interpro_description=Exonuclease GO=Molecular Function: exonuclease activity (GO:0004527), Cellular Component: intracellular (GO:0005622))
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ACD28_95_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
11126..11368
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transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
hypothetical protein Tax=GWA2_PER_44_7
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ACD28_95_10
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
11371..12150
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ATP synthase F0 subunit alpha
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=224 to=246)
transmembrane_regions (db=TMHMM db_id=tmhmm from=198 to=220)
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ACD28_95_11
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
12188..12415
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ATP synthase F0, C subunit
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
ATPASE_C (db=PatternScan db_id=PS00605 from=38 to=59 evalue=0.0 interpro_id=IPR020537 interpro_description=ATPase, F0 complex, subunit C, DCCD-binding site)
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ACD28_95_12
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
12443..12940
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coiled-coil (db=Coil db_id=coil from=51 to=97 evalue=NA)
seg (db=Seg db_id=seg from=62 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
ATP-synt_B (db=HMMPfam db_id=PF00430 from=15 to=138 evalue=1.3e-13 interpro_id=IPR002146 interpro_description=ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO=Molecular Function: hydrogen ion transmembrane transporter activity (GO:0015078), Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, coupling factor F(o) (GO:0045263))
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ACD28_95_13
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
12966..13616
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seg (db=Seg db_id=seg from=17 to=32)
OSCP (db=HMMPfam db_id=PF00213 from=94 to=209 evalue=3.4e-05 interpro_id=IPR000711 interpro_description=ATPase, F1 complex, OSCP/delta subunit GO=Cellular Component: plasma membrane (GO:0005886), Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933))
hypothetical protein Tax=GWA2_PER_44_7
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ACD28_95_14
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
13628..15136
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ATP synthase subunit alpha n=1 Tax=Nitratiruptor sp. SB155-2 RepID=ATPA_NITSB (db=UNIREF evalue=2.0e-159 bit_score=565.0 identity=60.51 coverage=93.2405566600398)
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
seg (db=Seg db_id=seg from=227 to=237)
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ACD28_95_15
uncultured bacterium, Bacteria
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Not on your lists |
15143..16042
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ATP synthase F1 subunit gamma
ATP-synt (db=HMMPfam db_id=PF00231 from=4 to=293 evalue=2.7e-70 interpro_id=IPR000131 interpro_description=ATPase, F1 complex, gamma subunit GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, rotational mechanism (GO:0046961))
ATP synthase (F1-ATPase), gamma subunit (db=superfamily db_id=SSF52943 from=6 to=299 evalue=1.8e-62 interpro_id=IPR000131 interpro_description=ATPase, F1 complex, gamma subunit GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, ro
ATPsyn_F1gamma: ATP synthase F1, gamma (db=HMMTigr db_id=TIGR01146 from=1 to=296 evalue=1.6e-55 interpro_id=IPR000131 interpro_description=ATPase, F1 complex, gamma subunit GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, rotati
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ACD28_95_16
uncultured bacterium, Bacteria
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Not on your lists |
16067..17470
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ATP synthase subunit beta 2 n=19 Tax=Listeria RepID=ATPB2_LISMF (db=UNIREF evalue=9.0e-174 bit_score=613.0 identity=68.69 coverage=92.948717948718)
atpD; ATP synthase F0F1 subunit beta
atpD; ATP synthase F0F1 subunit beta
seg (db=Seg db_id=seg from=9 to=22)
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ACD28_95_17
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
17482..17904
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seg (db=Seg db_id=seg from=54 to=60)
ATP-synt_DE_N (db=HMMPfam db_id=PF02823 from=5 to=75 evalue=4.3e-10 interpro_id=IPR020546 interpro_description=ATPase, F1 complex, delta/epsilon subunit, N-terminal GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, rotational mec
Epsilon subunit of F1F0-ATP synthase N-terminal domain (db=superfamily db_id=SSF51344 from=3 to=75 evalue=5.5e-09 interpro_id=IPR020546 interpro_description=ATPase, F1 complex, delta/epsilon subunit, N-terminal GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proto
no description (db=Gene3D db_id=G3DSA:2.60.15.10 from=2 to=91 evalue=4.1e-06 interpro_id=IPR020546 interpro_description=ATPase, F1 complex, delta/epsilon subunit, N-terminal GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, rotat
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ACD28_95_18
uncultured bacterium, Bacteria
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Not on your lists |
17982..19025
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17982..19025 + (rbs_motif=TAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD93881.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD28_95_19
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(19090..21072)
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Excinuclease ABC, B subunit n=1 Tax=Thermincola sp. JR RepID=D5XCB5_9FIRM (db=UNIREF evalue=0.0 bit_score=841.0 identity=62.87 coverage=97.428139183056)
excinuclease ABC subunit B
excinuclease ABC subunit B
seg (db=Seg db_id=seg from=254 to=265)
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ACD28_95_20
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
21223..22383
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seg (db=Seg db_id=seg from=74 to=86)
hypothetical protein Tax=GWA2_PER_44_7
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ACD28_95_21
uncultured bacterium, Bacteria
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Not on your lists |
22449..24206
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ABC transporter related protein
ABC transporter related protein
ABC transporter related n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VUN0_DYAFD (db=UNIREF evalue=3.0e-142 bit_score=509.0 identity=41.71 coverage=98.6348122866894)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
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ACD28_95_22
uncultured bacterium, Bacteria
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Not on your lists |
24226..25365
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hypothetical protein
YibE/F family protein n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=D3Q6T1_STANL (db=UNIREF evalue=8.0e-39 bit_score=164.0 identity=39.33 coverage=77.3684210526316)
transmembrane_regions (db=TMHMM db_id=tmhmm from=352 to=374)
transmembrane_regions (db=TMHMM db_id=tmhmm from=310 to=332)
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ACD28_95_23
uncultured bacterium, Bacteria
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Not on your lists |
25352..25585
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25352..25585 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD93886.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD28_95_24
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
25627..26064
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seg (db=Seg db_id=seg from=103 to=120)
hypothetical protein Tax=GWA2_PER_44_7
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ACD28_95_25
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(26434..26829)
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ribulose-phosphate 3-epimerase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372EC (db=UNIREF evalue=4.0e-30 bit_score=133.0 identity=54.14 coverage=96.2121212121212)
rpe; ribulose-phosphate 3-epimerase
RIBUL_P_3_EPIMER_2 (db=PatternScan db_id=PS01086 from=50 to=72 evalue=0.0 interpro_id=IPR000056 interpro_description=Ribulose-phosphate 3-epimerase GO=Molecular Function: ribulose-phosphate 3-epimerase activity (GO:0004750), Biological Process: carbohydrate metabolic process (GO:0005975))
RIBULOSE-5-PHOSPHATE-3-EPIMERASE (db=HMMPanther db_id=PTHR11749 from=1 to=126 evalue=3.8e-39 interpro_id=IPR000056 interpro_description=Ribulose-phosphate 3-epimerase GO=Molecular Function: ribulose-phosphate 3-epimerase activity (GO:0004750), Biological Process: carbohydrate metabolic process (GO:0005975))
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ACD28_95_26
uncultured bacterium, Bacteria
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Not on your lists |
comp(27129..27569)
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RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.26)
Sugar-phosphate isomerase, RpiB/LacA/LacB types (db=HMMPIR db_id=PIRSF005384 from=1 to=145 evalue=1.7e-66 interpro_id=IPR003500 interpro_description=Ribose/galactose isomerase GO=Biological Process: carbohydrate metabolic process (GO:0005975))
rpiB_lacA_lacB: sugar-phosphate isomer (db=HMMTigr db_id=TIGR00689 from=3 to=146 evalue=1.6e-64 interpro_id=IPR003500 interpro_description=Ribose/galactose isomerase GO=Biological Process: carbohydrate metabolic process (GO:0005975))
rpiB: ribose 5-phosphate isomerase B (db=HMMTigr db_id=TIGR01120 from=2 to=144 evalue=2.2e-57 interpro_id=IPR004785 interpro_description=Ribose 5-phosphate isomerase B GO=Molecular Function: ribose-5-phosphate isomerase activity (GO:0004751), Biological Process: pentose-phosphate shunt (GO:0006098))
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ACD28_95_27
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(27600..27866)
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prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
seg (db=Seg db_id=seg from=4 to=14)
RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1,2,3,4 (db=HMMPanther db_id=PTHR10210:SF14 from=1 to=87 evalue=3.3e-17)
RIBOSE-PHOSPHATE PYROPHOSPHOKINASE (db=HMMPanther db_id=PTHR10210 from=1 to=87 evalue=3.3e-17)
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