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ACD28_126

Alias: ACD28_55434.4039.9

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_126_1
unknown

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comp(2..70)
DNA (69bp) protein (23aa)
2..70 - (rbs_motif=TAA rbs_spacer=3bp)
ACD28_126_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(74..1243)
DNA (1170bp) protein (390aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=94 to=108)
hypothetical protein alias=ACD28_C00126G00002,ACD28_55434.4039.9G0002,ACD28_55434.4039.9_2 id=32208 tax=ACD28 species=Pseudomonas savastanoi genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=PER organism_desc=PER
ACD28_126_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(1215..2351)
DNA (1137bp) protein (379aa)
hypothetical protein (db=KEGG evalue=9.0e-17 bit_score=91.7 identity=27.72 coverage=73.0870712401055)
Clavaminate synthase-like (db=superfamily db_id=SSF51197 from=81 to=306 evalue=1.3e-24)
PhyH (db=HMMPfam db_id=PF05721 from=89 to=302 evalue=2.2e-15 interpro_id=IPR008775 interpro_description=Phytanoyl-CoA dioxygenase)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_126_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(2364..2942)
DNA (579bp) protein (193aa)
coiled-coil (db=Coil db_id=coil from=51 to=72 evalue=NA)
ITPase-like (db=superfamily db_id=SSF52972 from=1 to=184 evalue=8.7e-21)
NTPase_I-T (db=HMMPfam db_id=PF01931 from=6 to=174 evalue=8.3e-14 interpro_id=IPR002786 interpro_description=Protein of unknown function DUF84)
no description (db=Gene3D db_id=G3DSA:3.90.950.10 from=1 to=183 evalue=2.3e-09)
ACD28_126_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(2955..3512)
DNA (558bp) protein (186aa)
hypothetical protein (db=KEGG evalue=2.0e-10 bit_score=68.6 identity=39.62 coverage=53.763440860215)
seg (db=Seg db_id=seg from=126 to=138)
coiled-coil (db=Coil db_id=coil from=52 to=73 evalue=NA)
ITPase-like (db=superfamily db_id=SSF52972 from=1 to=181 evalue=8.0e-28)
ACD28_126_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3626..3922
DNA (297bp) protein (99aa)
3626..3922 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_126_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(3894..4076)
DNA (183bp) protein (61aa)
3894..4076 - (rbs_motif=None rbs_spacer=None)
FolC bifunctional protein {ECO:0000313|EMBL:KKT76046.1}; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
Displaying 7 items

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