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cg1_0.2_scaffold_678_c

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_678_c_trna_1
unknown

Not on your lists

comp(124..210)
DNA (87bp)
transferRNA
cg1_0.2_scaffold_678_c_1
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(427..1335)
DNA (909bp) protein (303aa)
HtpX2; heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=CG_Nomura_01
HtpX2; heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-] id=5803462 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
HtpX2; heat shock protein HtpX
cg1_0.2_scaffold_678_c_2
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1345..1539)
DNA (195bp) protein (65aa)
Tax=CG_Nomura_01
cg1_0.2_scaffold_678_c_3
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1562..2122)
DNA (561bp) protein (187aa)
LemA family protein; K03744 LemA protein Tax=CG_Nomura_01
membrane protein
cg1_0.2_scaffold_678_c_4
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2683..2916
DNA (234bp) protein (78aa)
Preprotein translocase SecG subunit Tax=CG_Nomura_01
Preprotein translocase SecG subunit id=5803424 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
cg1_0.2_scaffold_678_c_5
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3085..4749
DNA (1665bp) protein (555aa)
putative ABC transporter substrate binding protein Tax=CG_Nomura_01
family 5 extracellular solute-binding protein
cg1_0.2_scaffold_678_c_6
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4938..6968
DNA (2031bp) protein (677aa)
beta-lactamase domain-containing protein; K12574 ribonuclease J [EC:3.1.-.-] Tax=CG_Nomura_01
beta-lactamase domain-containing protein
cg1_0.2_scaffold_678_c_7
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7093..8265
DNA (1173bp) protein (391aa)
Major facilitator superfamily MFS_1 Tax=CG_Nomura_01
cg1_0.2_scaffold_678_c_8
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8292..9278)
DNA (987bp) protein (329aa)
Uncharacterized protein Tax=CG_Nomura_01
cg1_0.2_scaffold_678_c_9
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9283..9783)
DNA (501bp) protein (167aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Nomura_01
RNA polymerase sigma factor, sigma-70 family id=15190917 bin=GWC1_OP11_49_16_COMPLETE species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
ECF subfamily RNA polymerase sigma-24 factor
cg1_0.2_scaffold_678_c_10
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9897..10319)
DNA (423bp) protein (141aa)
Tax=CG_Nomura_01
cg1_0.2_scaffold_678_c_11
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10460..11803)
DNA (1344bp) protein (448aa)
putative DEAD/DEAH box helicase domain protein Tax=CG_Nomura_01
ATP-dependent RNA helicase RhlE
cg1_0.2_scaffold_678_c_12
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12020..12571)
DNA (552bp) protein (184aa)
hypothetical protein Tax=CG_Nomura_01
hypothetical protein id=15189881 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
hypothetical protein
cg1_0.2_scaffold_678_c_13
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12643..12975)
DNA (333bp) protein (111aa)
Tax=CG_Nomura_01
cg1_0.2_scaffold_678_c_14
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13124..13627)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MI36_CORCM rbh
hypothetical protein Tax=CG_Nomura_01
hypothetical protein
cg1_0.2_scaffold_678_c_15
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13707..14381)
DNA (675bp) protein (225aa)
Tax=CG_Nomura_01
cg1_0.2_scaffold_678_c_16
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14863..15363)
DNA (501bp) protein (167aa)
Tax=CG_Nomura_01
cg1_0.2_scaffold_678_c_17
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15385..16857)
DNA (1473bp) protein (491aa)
yheS; ABC transporter ATP-binding protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=CG_Nomura_01
hypothetical protein
cg1_0.2_scaffold_678_c_18
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17006..17341)
DNA (336bp) protein (112aa)
Tax=CG_Nomura_01
cg1_0.2_scaffold_678_c_19
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17417..17860)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XFS1_9BACT rbh
hypothetical protein Tax=CG_Nomura_01
hypothetical protein
cg1_0.2_scaffold_678_c_20
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17914..19137)
DNA (1224bp) protein (408aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=CG_Nomura_01
hypothetical protein id=15190295 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
multidrug ABC transporter substrate-binding protein
cg1_0.2_scaffold_678_c_21
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19134..19850)
DNA (717bp) protein (239aa)
PhnL; ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=CG_Nomura_01
PhnL; ABC transporter; K02003 putative ABC transport system ATP-binding protein id=5802744 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) rbh
ABC transporter
cg1_0.2_scaffold_678_c_22
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19861..21129)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YFD8_9BACT rbh
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=CG_Nomura_01
RND family efflux transporter MFP subunit
cg1_0.2_scaffold_678_c_23
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21152..21664)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YFD8_9BACT
secretion protein HlyD Tax=CG_Nomura_01
secretion protein HlyD
cg1_0.2_scaffold_678_c_24
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21674..22204)
DNA (531bp) protein (177aa)
transmembrane_regions Tax=CG_Nomura_01
transmembrane_regions id=5802742 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) rbh
cg1_0.2_scaffold_678_c_25
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22239..22640)
DNA (402bp) protein (134aa)
transmembrane_regions Tax=CG_Nomura_01
cg1_0.2_scaffold_678_c_26
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22734..23108)
DNA (375bp) protein (125aa)
Tax=CG_Nomura_01
cg1_0.2_scaffold_678_c_27
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23266..23364)
DNA (99bp) protein (33aa)
Tax=CG_Nomura_01
cg1_0.2_scaffold_678_c_28
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23440..24012)
DNA (573bp) protein (191aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Nomura_01
ECF subfamily RNA polymerase sigma-24 subunit
cg1_0.2_scaffold_678_c_29
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23999..24781)
DNA (783bp) protein (261aa)
Methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=CG_Nomura_01
folD; methylenetetrahydrofolate dehydrogenase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=15189760 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
Methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5)
Displaying items 1-30 of 47 in total

View Taxonomy