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cg2_3.0_scaffold_3516_c

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3516_c_1
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(374..721)
DNA (348bp) protein (116aa)
UPF0102 protein FSAG_02018 n=2 Tax=Fusobacterium periodonticum RepID=C3WMA2_9FUSO rbh
hypothetical protein Tax=CG_Berkel_03
hypothetical protein
cg2_3.0_scaffold_3516_c_2
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists


comp(725..1237)
DNA (513bp) protein (171aa)
50S ribosomal protein L19 n=1 Tax=uncultured bacterium RepID=K2A4W8_9BACT rbh
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=CG_Berkel_03
50S ribosomal protein L19
cg2_3.0_scaffold_3516_c_3
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(1694..1942)
DNA (249bp) protein (83aa)
Tax=CG_Berkel_03
cg2_3.0_scaffold_3516_c_4
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists


comp(2671..2943)
DNA (273bp) protein (91aa)
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=CG_Berkel_03
rpmA; 50S ribosomal protein L27
cg2_3.0_scaffold_3516_c_5
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

3199..6627
DNA (3429bp) protein (1143aa)
dnaE; DNA polymerase III DnaE (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=CG_Berkel_03
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZK70_9BACT rbh
cg2_3.0_scaffold_3516_c_6
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(6630..7538)
DNA (909bp) protein (303aa)
NADH dehydrogenase Tax=CG_Berkel_03
ahpF; alkyl hydroperoxide reductase subunit F
cg2_3.0_scaffold_3516_c_7
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(7549..8085)
DNA (537bp) protein (179aa)
hypothetical protein Tax=CG_Berkel_03
hypothetical protein
cg2_3.0_scaffold_3516_c_8
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(8075..9148)
DNA (1074bp) protein (358aa)
glycosyl transferase family protein; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] Tax=CG_Berkel_03
Glycosyl transferase, family 4 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRC3_9FIRM id=86273 bin=ACD58 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58 rbh
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
cg2_3.0_scaffold_3516_c_9
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(9322..9915)
DNA (594bp) protein (198aa)
nucleoside-diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=CG_Berkel_03
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI000373148B rbh
nucleoside-diphosphate kinase
cg2_3.0_scaffold_3516_c_10
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(9954..11168)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZN03_9BACT rbh
peptidase M16 domain-containing protein Tax=CG_Berkel_03
peptidase M16 domain-containing protein
cg2_3.0_scaffold_3516_c_11
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(11173..11664)
DNA (492bp) protein (164aa)
putative small multi-drug export Tax=CG_Berkel_03
putative small multi-drug export
cg2_3.0_scaffold_3516_c_12
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(11679..12272)
DNA (594bp) protein (198aa)
hypothetical protein Tax=CG_Berkel_03
putative membrane-associated phosphatase
cg2_3.0_scaffold_3516_c_13
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

12302..13225
DNA (924bp) protein (308aa)
putative Tyrosine recombinase xerD Tax=CG_Berkel_03
hypothetical protein
cg2_3.0_scaffold_3516_c_14
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

13307..14389
DNA (1083bp) protein (361aa)
Ribosome-binding ATPase YchF n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X053_NITSE rbh
GTP-binding protein ychf; K06942 Tax=CG_Berkel_03
GTP-binding protein ychf
cg2_3.0_scaffold_3516_c_15
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

14604..15170
DNA (567bp) protein (189aa)
Tax=CG_Berkel_03
cg2_3.0_scaffold_3516_c_16
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

15179..15688
DNA (510bp) protein (170aa)
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=CG_Berkel_03
single-strand binding protein
cg2_3.0_scaffold_3516_c_17
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists


15697..15900
DNA (204bp) protein (68aa)
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RBG_13_Berkelbacteria_40_8_curated
rpsR; 30S ribosomal protein S18
cg2_3.0_scaffold_3516_c_18
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

15973..16524
DNA (552bp) protein (184aa)
efp; Elongation factor P Tax=CG_Berkel_03
efp; Elongation factor P
cg2_3.0_scaffold_3516_c_19
unknown

Not on your lists

comp(16567..16827)
DNA (261bp) protein (87aa)

This feature has no annotations

cg2_3.0_scaffold_3516_c_20
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

16955..17971
DNA (1017bp) protein (339aa)
hypothetical protein Tax=CG_Berkel_03
hypothetical protein id=86297 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58 rbh
hypothetical protein
cg2_3.0_scaffold_3516_c_21
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

17968..19128
DNA (1161bp) protein (387aa)
hypothetical protein Tax=CG_Berkel_03
hypothetical protein id=86291 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58 rbh
hypothetical protein
cg2_3.0_scaffold_3516_c_22
unknown

Not on your lists

comp(19211..19537)
DNA (327bp) protein (109aa)

This feature has no annotations

cg2_3.0_scaffold_3516_c_23
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(19706..20446)
DNA (741bp) protein (247aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CTU4_9CLOT rbh
prepilin signal peptidase PulO-like peptidase Tax=CG_Berkel_03
type IV leader peptidase family protein
cg2_3.0_scaffold_3516_c_24
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(20504..20974)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037A71CB rbh
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=CG_Berkel_03
pilA; fimbrial protein pilA
cg2_3.0_scaffold_3516_c_25
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(21138..22184)
DNA (1047bp) protein (349aa)
Tfp pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC Tax=CG_Berkel_03
type II secretion system F domain protein; K02653 type IV pilus assembly protein PilC id=87321 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58 rbh
Tfp pilus biogenesis protein PilC
cg2_3.0_scaffold_3516_c_26
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(22263..23339)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A3W4_9BACT rbh
twitching motility protein; K02669 twitching motility protein PilT Tax=CG_Berkel_03
twitching motility protein
cg2_3.0_scaffold_3516_c_27
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(23385..25619)
DNA (2235bp) protein (745aa)
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=CG_Berkel_03
type IV-A pilus assembly ATPase PilB
cg2_3.0_scaffold_3516_c_28
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(25626..25868)
DNA (243bp) protein (81aa)
Tax=CG_Berkel_03
cg2_3.0_scaffold_3516_c_29
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(25868..26503)
DNA (636bp) protein (212aa)
Tax=CG_Berkel_03
cg2_3.0_scaffold_3516_c_30
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(27023..27568)
DNA (546bp) protein (182aa)
Tax=CG_Berkel_03
Displaying items 1-30 of 31 in total

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