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cg_0.2_sub10_scaffold_541_c

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_541_c_1
GWA1_OD1_44_13, Parcubacteria, Bacteria

Not on your lists

124..588
DNA (465bp) protein (155aa)
Single-stranded DNA-binding protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWC5_9BACT
Single-stranded DNA-binding protein Tax=GWA1_OD1_44_13
single-strand binding protein
cg_0.2_sub10_scaffold_541_c_2
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


737..946
DNA (210bp) protein (70aa)
Suspect SCG annotation. See neighboring gene [cg_0.2_sub10_scaffold_541_c_3].
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=CG_Nomura_02
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=5803296 bin=OD1_GWC2_34_28 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S18
cg_0.2_sub10_scaffold_541_c_3
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(1068..1277)
DNA (210bp) protein (70aa)
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=CG_Nomura_02
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=5803296 bin=OD1_GWC2_34_28 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S18
cg_0.2_sub10_scaffold_541_c_4
GWA1_OD1_44_13, Parcubacteria, Bacteria

Not on your lists

comp(1426..1890)
DNA (465bp) protein (155aa)
Single-stranded DNA-binding protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWC5_9BACT
Single-stranded DNA-binding protein Tax=GWA1_OD1_44_13
single-strand binding protein
cg_0.2_sub10_scaffold_541_c_5
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2057..2527)
DNA (471bp) protein (157aa)
seg Tax=CG_Nomura_02
seg id=5227232 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg_0.2_sub10_scaffold_541_c_6
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2693..3511)
DNA (819bp) protein (273aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=CG_Nomura_02
sec-independent protein translocase protein (EC:3.1.21.-); K03424 TatD DNase family protein [EC:3.1.21.-] id=5803293 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
TatD family hydrolase
cg_0.2_sub10_scaffold_541_c_7
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3663..5261)
DNA (1599bp) protein (533aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=CG_Nomura_02
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=5803291 bin=OD1_GWC2_34_28 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
methionyl-tRNA synthetase
cg_0.2_sub10_scaffold_541_c_8
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5352..6422)
DNA (1071bp) protein (357aa)
hypothetical protein Tax=CG_Nomura_02
hypothetical protein id=5803290 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg_0.2_sub10_scaffold_541_c_9
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6545..7813)
DNA (1269bp) protein (423aa)
hypothetical protein Tax=CG_Nomura_02
peptidase M16 domain-containing protein id=5803288 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg_0.2_sub10_scaffold_541_c_10
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7826..9160)
DNA (1335bp) protein (445aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=CG_Nomura_02
id=5227237 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
glycyl-tRNA synthetase
cg_0.2_sub10_scaffold_541_c_11
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9255..11165)
DNA (1911bp) protein (637aa)
transmembrane_regions Tax=CG_Nomura_02
transmembrane_regions id=5803285 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_541_c_12
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11291..11878)
DNA (588bp) protein (196aa)
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=CG_Nomura_02
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) id=5803284 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_541_c_13
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11921..15397)
DNA (3477bp) protein (1159aa)
Isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=CG_Nomura_02
Isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=5803283 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
cg_0.2_sub10_scaffold_541_c_14
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15463..16161)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361D698
hypothetical protein Tax=CG_Nomura_02
hypothetical protein
cg_0.2_sub10_scaffold_541_c_15
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(16214..19468)
DNA (3255bp) protein (1085aa)
PKD protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1XUV0_9BACT
VCBS repeat-containing protein,YVTN family beta-propeller repeat protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
hypothetical protein
Displaying 15 items

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