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ACD30_45

Alias: ACD30_148957.2019.5

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD30_45_1

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comp(2..469)
DNA (468bp) protein (156aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=27)
no description (db=Gene3D db_id=G3DSA:3.30.750.34 from=52 to=133 evalue=7.5e-14)
ClpP/crotonase (db=superfamily db_id=SSF52096 from=51 to=135 evalue=2.8e-11)
ACD30_45_2

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comp(482..727)
DNA (246bp) protein (82aa)
30S ribosomal protein S18
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479 from=1 to=80 evalue=1.1e-21 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479:SF16 from=1 to=80 evalue=1.1e-21)
Ribosomal_S18 (db=HMMPfam db_id=PF01084 from=24 to=75 evalue=1.9e-17 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD30_45_3
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

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comp(822..1310)
DNA (489bp) protein (163aa)
hypothetical protein
seg (db=Seg db_id=seg from=133 to=147)
seg (db=Seg db_id=seg from=152 to=161)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=4 to=161 evalue=3.3e-44 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
ACD30_45_4

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comp(1318..1599)
DNA (282bp) protein (94aa)
rpsF; 30S ribosomal protein S6
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=3 to=92 evalue=3.1e-25 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=93 evalue=4.8e-23 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
no description (db=Gene3D db_id=G3DSA:3.30.70.60 from=1 to=93 evalue=3.0e-21 interpro_id=IPR014717 interpro_description=Translation elongation factor EF1B/ribosomal protein S6)
ACD30_45_5

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comp(1674..2051)
DNA (378bp) protein (126aa)
GTP-binding protein ychf
seg (db=Seg db_id=seg from=2 to=16)
GTP-BINDING PROTEIN-RELATED (db=HMMPanther db_id=PTHR23305 from=1 to=125 evalue=7.9e-64)
GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR23305:SF4 from=1 to=125 evalue=7.9e-64 interpro_id=IPR004396 interpro_description=Conserved hypothetical protein CHP00092 GO=Molecular Function: GTP binding (GO:0005525))
Displaying 5 items

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