ggKbase home page

Ig3397_v2_scaffold_1166

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1166_1
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

3..593
DNA (591bp) protein (197aa)
Conserved domain protein id=4019051 bin=GWF2_Ignavibacteria_35_20 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
lipoprotein precursor
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_2
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(783..3371)
DNA (2589bp) protein (863aa)
ddf:DEFDS_1169 nrdA; ribonucleoside-diphosphate reductase alpha chain (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=43745 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
ribonucleotide-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_3
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

3478..3786
DNA (309bp) protein (103aa)
Thioredoxin n=2 Tax=Eikenella corrodens RepID=C0DUP5_EIKCO
thioredoxin
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_trna_1
unknown

Not on your lists

3850..3920
DNA (71bp)
transferRNA
Ig3397_v2_scaffold_1166_trna_2
unknown

Not on your lists

3949..4033
DNA (85bp)
transferRNA
Ig3397_v2_scaffold_1166_4
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

4131..4694
DNA (564bp) protein (188aa)
LemA-like protein id=2442733 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_5
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

4730..6088
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PZC2_9BACT rbh
membrane protein of unknown function rbh
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_6
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

6123..6995
DNA (873bp) protein (291aa)
htpX; membrane protease (EC:3.4.24.-) rbh
Protease HtpX homolog id=3133215 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_7
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

6999..8018
DNA (1020bp) protein (340aa)
Putative uncharacterized protein id=2442727 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
conserved membrane protein of unknown function rbh
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_8
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

7999..10017
DNA (2019bp) protein (673aa)
ligA; DNA ligase, NAD-dependent (EC:6.5.1.2) rbh
DNA ligase id=3133219 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_9
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

10021..10410
DNA (390bp) protein (130aa)
hypothetical protein COdytL_13094 id=5225955 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_10
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

10423..11103
DNA (681bp) protein (227aa)
ABC transporter, ATPase subunit; K02003 id=14198 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
ABC transporter, ATPase subunit; K02003 putative ABC transport system ATP-binding protein
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_11
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

11100..12302
DNA (1203bp) protein (401aa)
ABC transporter permease protein n=1 Tax=uncultured archaeon GZfos26B2 RepID=Q64C67_9ARCH
ABC transporter, permease protein
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_12
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(12291..12866)
DNA (576bp) protein (192aa)
Transcriptional regulator, TetR family n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RD63_AMMDK
TetR family transcriptional regulator
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_13
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(12871..14634)
DNA (1764bp) protein (588aa)
YhgE/Pip C-terminal domain protein n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DK91_9FIRM
YhgE/Pip C-terminal domain-containing protein; K01421 putative membrane protein
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_14
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(14708..16360)
DNA (1653bp) protein (551aa)
ADP-ribose diphosphatase id=2442697 bin=GWC2_TM7_44_17 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein rbh
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_15
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(16361..17632)
DNA (1272bp) protein (424aa)
putative Nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase id=2442691 bin=GWC2_TM7_44_17 species=Ketogulonicigenium vulgare genus=Ketogulonicigenium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_16
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(17645..18292)
DNA (648bp) protein (216aa)
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
Pyrazinamidase/nicotinamidase n=1 Tax=uncultured prokaryote RepID=H5S9H3_9ZZZZ
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_17
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(18553..19230)
DNA (678bp) protein (226aa)
Hydrolase, NUDIX family id=2442681 bin=GWC2_TM7_44_17 species=Corynebacterium durum genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_18
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(19269..21173)
DNA (1905bp) protein (635aa)
NAD+ synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
NAD+ synthetase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZM7_CLOCD
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_19
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

21233..21847
DNA (615bp) protein (205aa)
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase id=2442678 bin=GWC2_TM7_44_17 species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1166_20
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(21884..22207)
DNA (324bp) protein (108aa)
RNP-1 like RNA-binding protein id=2442671 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
RNP-1 like RNA-binding protein
Tax=BJP_IG2103_TM7_39_1400
Displaying 22 items

View Taxonomy