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SCNpilot_cont_750_bf_scaffold_2862

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2862_1
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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comp(51..221)
DNA (171bp) protein (57aa)
Suspect SCG annotation. See neighboring gene [SCNpilot_cont_750_bf_scaffold_2862_2].
Valyl-tRNA synthetase id=4041525 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=CG_TM7_01
SCNpilot_cont_750_bf_scaffold_2862_2
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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comp(516..2231)
DNA (1716bp) protein (572aa)
valS; Valyl-tRNA synthetase (EC:6.1.1.9) rbh
id=5226267 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7 rbh
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_750_bf_scaffold_2862_3
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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comp(2304..2621)
DNA (318bp) protein (106aa)
valS; Valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PYG9_9BACT
Suspect SCG annotation. See neighboring gene [SCNpilot_cont_750_bf_scaffold_2862_2].
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_750_bf_scaffold_2862_4
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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2720..3703
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI0003043C5C rbh
putative Uncharacterized methicillin resistance protein rbh
Tax=CG_TM7_01
SCNpilot_cont_750_bf_scaffold_2862_5
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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comp(3711..4373)
DNA (663bp) protein (221aa)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp id=4064140 bin=GWC2_TM7_48_9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
gcp; putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_750_bf_scaffold_2862_6
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(4364..4741)
DNA (378bp) protein (126aa)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PMX8_9BACT
Suspect SCG annotation. See neighboring gene [SCNpilot_cont_750_bf_scaffold_2862_5].
gcp; putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
Tax=CG_TM7_01
SCNpilot_cont_750_bf_scaffold_2862_7
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

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4852..7266
DNA (2415bp) protein (805aa)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
SCNpilot_cont_750_bf_scaffold_2862_8
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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7275..8597
DNA (1323bp) protein (441aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVB9_9BACT rbh
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_750_bf_scaffold_2862_9
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(8594..9628)
DNA (1035bp) protein (345aa)
FemAB family peptidoglycan biosynthesis protein id=4041532 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
putative Methicillin resistance protein rbh
Tax=CG_TM7_01
SCNpilot_cont_750_bf_scaffold_2862_10
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(9682..10227)
DNA (546bp) protein (182aa)
bifunctional phosphoglucose/phosphomannose isomerase id=4041542 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_750_bf_scaffold_2862_11
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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10296..11369
DNA (1074bp) protein (358aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
bifunctional phosphoglucose/phosphomannose isomerase id=4041544 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_750_bf_scaffold_2862_12
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11376..11666)
DNA (291bp) protein (97aa)
ABC superfamily ATP binding cassette transporter, membrane protein id=4041547 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
putative Efflux ABC transporter, permease protein
Tax=CG_TM7_01
Displaying 12 items

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