ggKbase home page

ACD38_56

Alias: ACD38_327931.4444.5

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD38_56_1

Not on your lists

2..766
DNA (765bp) protein (255aa)
seg (db=Seg db_id=seg from=4 to=18)
seg (db=Seg db_id=seg from=164 to=180)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=1 to=121 evalue=7.9e-13 interpro_id=IPR012338 interpro_description=Beta-lactamase-type transpeptidase fold)
Uncharacterized protein {ECO:0000313|EMBL:EKD85042.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD38_56_2
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

774..983
DNA (210bp) protein (70aa)
774..983 + (rbs_motif=TAA rbs_spacer=7bp)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
ACD38_56_3
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(973..1428)
DNA (456bp) protein (152aa)
pheT; phenylalanyl-tRNA synthetase subunit beta
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=5 to=151 evalue=1.7e-23)
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=1 to=151 evalue=4.1e-18)
PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (db=HMMPanther db_id=PTHR10947 from=1 to=151 evalue=3.9e-09)
ACD38_56_4

Not on your lists

2037..2435
DNA (399bp) protein (133aa)
seg (db=Seg db_id=seg from=55 to=67)
seg (db=Seg db_id=seg from=117 to=127)
Uncharacterized protein {ECO:0000313|EMBL:EKD85039.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD38_56_5
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(2742..3785)
DNA (1044bp) protein (348aa)
Phenylalanyl-tRNA synthetase alpha chain (Phenylalanine--tRNA ligase alpha chain) n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MGN0_9BACT (db=UNIREF evalue=4.0e-77 bit_score=291.0 identity=41.38 coverage=99.1379310344828)
phenylalanyl-tRNA synthase subunit alpha (EC:6.1.1.20)
coiled-coil (db=Coil db_id=coil from=5 to=26 evalue=NA)
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=8 to=347 evalue=4.9e-93)
ACD38_56_6
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(3805..4476)
DNA (672bp) protein (224aa)
putative deacetylase
LmbE family protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6K0_SPHTD (db=UNIREF evalue=5.0e-36 bit_score=154.0 identity=40.89 coverage=89.2857142857143)
seg (db=Seg db_id=seg from=78 to=89)
LmbE-like (db=superfamily db_id=SSF102588 from=3 to=202 evalue=2.3e-36)
Displaying 6 items

View Taxonomy