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sw_4_scaffold_952

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_952_1
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

2..130
DNA (129bp) protein (43aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_13_RIF_OD1_08_37_53_curated
sw_4_scaffold_952_2
RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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399..920
DNA (522bp) protein (174aa)
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated
50S ribosomal protein L10 id=2076565 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L10
sw_4_scaffold_952_3

Not on your lists

938..1366
DNA (429bp) protein (143aa)
50S ribosomal protein L7/L12 n=1 Tax=Alkalibacillus haloalkaliphilus RepID=UPI0002D9B788
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:KKQ55915.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
50S ribosomal protein L12
sw_4_scaffold_952_4
R_RIF_OD1_05_43_12, RIF-OD1-5, Parcubacteria, Bacteria

Not on your lists

1512..2108
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036D1874
probable transcriptional regulator Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_05_43_12_curated
sw_4_scaffold_952_5
unknown

Not on your lists

2092..2313
DNA (222bp) protein (74aa)

This feature has no annotations

sw_4_scaffold_952_trna_1
unknown

Not on your lists

2155..2228
DNA (74bp)
transferRNA
sw_4_scaffold_952_6
CG_Magasa_02, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

2344..3318
DNA (975bp) protein (325aa)
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] Tax=CG_Magasa_02
Phosphomannomutase id=5800751 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
glmM; phosphomannomutase
sw_4_scaffold_952_7
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

3335..3751
DNA (417bp) protein (139aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:ADC70338.1}; EC=5.4.2.8 {ECO:0000313|EMBL:ADC70338.1};; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methano
Phosphomannomutase n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S674_METSF
sw_4_scaffold_952_8
CG_CPR14_01, CG_CPR14, Bacteria

Not on your lists

3822..5336
DNA (1515bp) protein (505aa)
glycogen/starch synthase; K00703 starch synthase [EC:2.4.1.21] Tax=CG_CPR14_01
Glycogen synthase id=1899170 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
glycogen/starch synthase
sw_4_scaffold_952_9
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5357..7114)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KNH5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL01181.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM
sw_4_scaffold_952_10
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7125..8819)
DNA (1695bp) protein (565aa)
glgP; glycogen phosphorylase (EC:2.4.1.1) Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
alpha-glucan phosphorylase (EC:2.4.1.1)
Glycogen phosphorylase id=4384207 bin=GWF2_Ignavibacteria_35_20 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
sw_4_scaffold_952_11
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

9755..10531
DNA (777bp) protein (259aa)
triosephosphate isomerase (EC:5.3.1.1 2.7.2.3); K15330 phosphoglycerate kinase / triosephosphate isomerase [EC:2.7.2.3 5.3.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
Triosephosphate isomerase n=2 Tax=Legionella longbeachae RepID=D3HNZ0_LEGLN
tpi; triosephosphate isomerase
sw_4_scaffold_952_trna_3
unknown

Not on your lists

comp(11076..11148)
DNA (73bp)
transferRNA
sw_4_scaffold_952_12
unknown

Not on your lists

comp(11148..11573)
DNA (426bp) protein (142aa)

This feature has no annotations

sw_4_scaffold_952_trna_2
unknown

Not on your lists

comp(11597..11671)
DNA (75bp)
transferRNA
sw_4_scaffold_952_13
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

11940..14471
DNA (2532bp) protein (844aa)
Glycosyl transferase family 2 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TN16_9CHLR
family 2 glycosyl transferase Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
glycosyl transferase family protein
sw_4_scaffold_952_14
R_OP11_Woesebacteria_40_22, Woesebacteria, Microgenomates, Bacteria

Not on your lists

14477..14785
DNA (309bp) protein (103aa)
Glycosyl transferase family 39 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5X2_9CHLR
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_40_22_curated
hypothetical protein
Displaying 17 items

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