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sw_7_scaffold_2611

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_2611_1
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

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2..325
DNA (324bp) protein (108aa)
50S ribosomal protein L6 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIB0_HALO1
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
50S ribosomal protein L6
sw_7_scaffold_2611_2
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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322..651
DNA (330bp) protein (110aa)
50S ribosomal protein L18 n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U9G9_OCEP5
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (s
sw_7_scaffold_2611_3
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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652..1125
DNA (474bp) protein (158aa)
30S ribosomal protein S5 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PM34_9BACT
rpsE; 30S ribosomal subunit protein S5 Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
rpsE; 30S ribosomal subunit protein S5
sw_7_scaffold_2611_4
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1112..1531
DNA (420bp) protein (140aa)
50S ribosomal protein L15 n=1 Tax=Paenibacillus terrigena RepID=UPI000364F708
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1227076 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source=
sw_7_scaffold_2611_5
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

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1532..2836
DNA (1305bp) protein (435aa)
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria o
Protein translocase subunit SecY id=2333345 bin=GWD1_TM7_39_7 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
sw_7_scaffold_2611_6
GWC2_CPR2_39_35, CPR2, Bacteria

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2951..3172
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 id=2152016 bin=GWD2_CPR2_39_7 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
Translation initiation factor IF-1 Tax=GWC2_CPR2_39_35
translation initiation factor IF-1
sw_7_scaffold_2611_7
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3403..3771
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LSW0_TEPAE
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium no
sw_7_scaffold_2611_8
GWC1_CPR2_41_48, CPR2, Bacteria

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3799..4191
DNA (393bp) protein (131aa)
30S ribosomal protein S11 id=2333351 bin=GWD1_TM7_39_7 species=Anaerofustis stercorihominis genus=Anaerofustis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
30S ribosomal protein S11 {ECO:0000313|EMBL:KKS08858.1}; TaxID=1618344 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC1_41_48.;"
30S ribosomal protein S11
sw_7_scaffold_2611_9
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

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4310..4918
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2693
rpsD; 30S ribosomal subunit protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
sw_7_scaffold_2611_10
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

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4929..5834
DNA (906bp) protein (302aa)
rpoA; RNA polymerase (alpha subunit) (EC:2.7.7.6) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha, partial id=2440932 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
sw_7_scaffold_2611_11
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

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5834..6100
DNA (267bp) protein (89aa)
50S ribosomal protein L17 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJ08_9CHLR
rplQ; ribosomal protein L17 (BL15) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
rplQ; 50S ribosomal protein L17
sw_7_scaffold_2611_12
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

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6215..6643
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Halomonas jeotgali RepID=UPI00034802BE
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral tax
sw_7_scaffold_2611_13
unknown

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6640..6717
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 13 items

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