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ACD3_75

Alias: ACD3_1942.7821.55

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD3_75_1

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3..1421
DNA (1419bp) protein (473aa)
seg (db=Seg db_id=seg from=300 to=314)
seg (db=Seg db_id=seg from=2 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=344 to=362)
ACD3_75_2
ACD3, Gracilibacteria, Bacteria

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1870..2226
DNA (357bp) protein (119aa)
putative uncharacterized protein
DUF559 (db=HMMPfam db_id=PF04480 from=10 to=112 evalue=4.9e-23 interpro_id=IPR007569 interpro_description=Protein of unknown function DUF559)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=2 to=117 evalue=1.2e-07 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
hypothetical protein alias=ACD3_1942.7821.55G0002,ACD3_1942.7821.55_2,ACD3_C00075G00002 id=50977 tax=ACD3 species=Acaryochloris marina genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=BD1-5 organism_desc=BD1-5
ACD3_75_3

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2423..3022
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=2 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSF2_9BACT (db=UNIREF evalue=3.0e-27 bit_score=124.0 identity=37.5 coverage=91.5)
hypothetical protein; K07002 (db=KEGG evalue=7.0e-13 bit_score=77.0 identity=32.73 coverage=79.0)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=6 to=191 evalue=2.2e-12)
DUF1234 (db=HMMPfam db_id=PF06821 from=28 to=172 evalue=4.9e-09 interpro_id=IPR010662 interpro_description=Protein of unknown function DUF1234)
ACD3_75_4
unknown

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comp(3405..3788)
DNA (384bp) protein (128aa)
50S ribosomal protein L12
50S ribosomal protein L7/L12 n=1 Tax=Selenomonas ruminantium RepID=Q84IF2_SELRU (db=UNIREF evalue=2.0e-16 bit_score=88.2 identity=61.34 coverage=90.625)
seg (db=Seg db_id=seg from=106 to=115)
seg (db=Seg db_id=seg from=37 to=58)
ACD3_75_5
unknown

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comp(4141..4899)
DNA (759bp) protein (253aa)
Ribosomal protein L10 n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LVR2_9FIRM (db=UNIREF evalue=3.0e-17 bit_score=92.4 identity=37.74 coverage=60.0790513833992)
ribosomal protein L10
seg (db=Seg db_id=seg from=180 to=217)
seg (db=Seg db_id=seg from=220 to=252)
ACD3_75_6
ACD3, Gracilibacteria, Bacteria

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comp(5344..5922)
DNA (579bp) protein (193aa)
5344..5922 - (rbs_motif=TTA rbs_spacer=3bp)
hypothetical protein Tax=ACD3
ACD3_75_7

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comp(5925..7499)
DNA (1575bp) protein (525aa)
hypothetical protein
seg (db=Seg db_id=seg from=4 to=20)
ClpP/crotonase (db=superfamily db_id=SSF52096 from=151 to=516 evalue=1.0e-44)
Peptidase_S41 (db=HMMPfam db_id=PF03572 from=336 to=501 evalue=2.0e-28 interpro_id=IPR005151 interpro_description=Peptidase S41 GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type peptidase activity (GO:0008236))
ACD3_75_8

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comp(7535..7885)
DNA (351bp) protein (117aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
Uncharacterized protein {ECO:0000313|EMBL:EKE28135.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Displaying 8 items

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