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AR1-0.1_scaffold_172

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR1-0.1_scaffold_172_1
unknown

Not on your lists

comp(214..501)
DNA (288bp) protein (96aa)

This feature has no annotations

AR1-0.1_scaffold_172_2

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comp(511..1167)
DNA (657bp) protein (219aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FVM7_9BACT
hypothetical protein
AR1-0.1_scaffold_172_3

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comp(1360..3792)
DNA (2433bp) protein (811aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AYA8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66707.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
AR1-0.1_scaffold_172_4

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3934..4380
DNA (447bp) protein (149aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G6K8_9BACT
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:EKE29967.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
RNA methyltransferase
AR1-0.1_scaffold_172_5

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4422..5795
DNA (1374bp) protein (458aa)
Peptidase U32 n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5QZC4_9FIRM id=69323 bin=ACD49 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Peptidase U32 {ECO:0000313|EMBL:EKD65767.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
peptidase family u32 family protein
AR1-0.1_scaffold_172_6

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comp(5862..6041)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BVM4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66289.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_172_7
unknown

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comp(6132..6947)
DNA (816bp) protein (272aa)

This feature has no annotations

AR1-0.1_scaffold_172_8

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comp(6950..7741)
DNA (792bp) protein (264aa)
hypothetical protein CLOSPO_01346 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=UPI00017945D8 id=68888 bin=ACD49 species=Clostridium sporogenes genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD66124.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_172_9

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comp(7800..8885)
DNA (1086bp) protein (362aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FXS9_9BACT rbh
hypothetical protein
AR1-0.1_scaffold_172_10
unknown

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8967..9437
DNA (471bp) protein (157aa)

This feature has no annotations

AR1-0.1_scaffold_172_11
unknown

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9483..10241
DNA (759bp) protein (253aa)

This feature has no annotations

AR1-0.1_scaffold_172_12
unknown

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10263..10484
DNA (222bp) protein (74aa)

This feature has no annotations

AR1-0.1_scaffold_172_13
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

10577..11245
DNA (669bp) protein (223aa)
hypothetical protein; K09125 hypothetical protein id=5096373 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKQ67664.1}; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_29.;"
protein of unknown function DUF165
AR1-0.1_scaffold_172_14

Not on your lists

11319..11960
DNA (642bp) protein (214aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53611.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
metal dependent phosphohydrolase; K06950 id=50801 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
metal dependent phosphohydrolase
AR1-0.1_scaffold_172_15
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

12241..13449
DNA (1209bp) protein (403aa)
Spermine synthase id=1971218 bin=GWD2_Clostridiales_32_59 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
spermine synthase
Tax=RBG_13_RIF_OD1_08_37_53_curated
AR1-0.1_scaffold_172_16
RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

13551..15125
DNA (1575bp) protein (525aa)
67 kDa myosin-cross-reactive antigen family protein; K10254 myosin-crossreactive antigen id=15190473 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
67 kDa myosin-cross-reactive antigen family protein
Tax=RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated
AR1-0.1_scaffold_172_17
unknown

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comp(15133..15327)
DNA (195bp) protein (65aa)

This feature has no annotations

AR1-0.1_scaffold_172_18

Not on your lists

comp(15646..16191)
DNA (546bp) protein (182aa)
frr; ribosome recycling factor; K02838 ribosome recycling factor id=35068 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ribosome-recycling factor
AR1-0.1_scaffold_172_19

Not on your lists

16359..17114
DNA (756bp) protein (252aa)
ABC transporter ATPase (EC:3.6.3.-); K01990 ABC-2 type transport system ATP-binding protein id=69085 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66402.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
Displaying 19 items

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