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RifSed_csp2_19ft_3_scaffold_6059

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_19ft_3_scaffold_6059_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(1..117)
DNA (117bp) protein (39aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(114..1730)
DNA (1617bp) protein (539aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2 id=75666 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
penicillin-binding protein 2
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(1732..2340)
DNA (609bp) protein (203aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=5093704 bin=PER_GWE2_39_6 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
rod shape-determining protein MreB
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(2283..2855)
DNA (573bp) protein (191aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=75602 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
rod shape-determining protein MreB
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2882..3451
DNA (570bp) protein (190aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=uncultured bacterium RepID=K2EV01_9BACT
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

3426..4328
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BKZ0_9BACT
methionyl-tRNA formyltransferase
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(4292..4543)
DNA (252bp) protein (84aa)
L28p-like id=75593 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

4606..5250
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ALZ1_9BACT rbh
peptidase M50
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_trna_4
unknown

Not on your lists

comp(5456..5540)
DNA (85bp)
transferRNA Tyr
RifSed_csp2_19ft_3_scaffold_6059_trna_3
unknown

Not on your lists

comp(5545..5615)
DNA (71bp)
transferRNA Thr
RifSed_csp2_19ft_3_scaffold_6059_9

Not on your lists

5644..6705
DNA (1062bp) protein (354aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=uncultured bacterium RepID=K2B2I9_9BACT rbh
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
RifSed_csp2_19ft_3_scaffold_6059_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(6695..6862)
DNA (168bp) protein (56aa)
transmembrane_regions 103..124 id=75497 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_11

Not on your lists

comp(6877..7071)
DNA (195bp) protein (65aa)
transmembrane_regions 103..124 id=75497 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD62912.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RifSed_csp2_19ft_3_scaffold_6059_trna_1
unknown

Not on your lists

7156..7228
DNA (73bp)
transferRNA Thr
RifSed_csp2_19ft_3_scaffold_6059_12

Not on your lists

comp(7228..8469)
DNA (1242bp) protein (414aa)
Glycosyltransferase {ECO:0000313|EMBL:EKD62911.1}; EC=2.4.1.- {ECO:0000313|EMBL:EKD62911.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glycosyltransferase n=1 Tax=uncultured bacterium RepID=K2AMX7_9BACT rbh
group 1 glycosyl transferase
RifSed_csp2_19ft_3_scaffold_6059_13

Not on your lists

8506..10434
DNA (1929bp) protein (643aa)
Sucrose phosphorylase n=2 Tax=Cyanothece RepID=A3IX64_9CHRO id=75500 bin=ACD52 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
Sucrose phosphorylase {ECO:0000313|EMBL:EKD62910.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glycosidase
RifSed_csp2_19ft_3_scaffold_6059_14
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

10636..11982
DNA (1347bp) protein (449aa)
hypothetical protein id=75496 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_trna_2
unknown

Not on your lists

11981..12051
DNA (71bp)
transferRNA Trp
RifSed_csp2_19ft_3_scaffold_6059_15
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

12325..13035
DNA (711bp) protein (237aa)
BAAT/Acyl-CoA thioester hydrolase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QQR0_ACEAZ id=5087767 bin=OP11_3 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
BAAT/Acyl-CoA thioester hydrolase
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_16
unknown

Not on your lists

comp(13015..13224)
DNA (210bp) protein (70aa)

This feature has no annotations

RifSed_csp2_19ft_3_scaffold_6059_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(13237..14019)
DNA (783bp) protein (261aa)
hypothetical protein id=52309 bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_18
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(14258..14488)
DNA (231bp) protein (77aa)
id=5087066 bin=GWF1_OP11_31_35_complete species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_19
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(15126..15308)
DNA (183bp) protein (61aa)
GreA_GreB 26..57 id=74963 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_20
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

15333..15941
DNA (609bp) protein (203aa)
transmembrane_regions 7..26 id=74960 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_21
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(15928..16314)
DNA (387bp) protein (129aa)
hypothetical protein id=74962 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_22
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(16274..16759)
DNA (486bp) protein (162aa)
hypothetical protein id=74962 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_6059_23
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(17078..17617)
DNA (540bp) protein (180aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=bacterium S5 RepID=D3BY99_9BACT id=74958 bin=ACD52 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
Tax=RBG_16_RIF_OP11_02_41_13_curated
Displaying 27 items

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