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PLM4_65_coex_sep16_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 144 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_20_1
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

3..500
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50884.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
Proposed peptidoglycan lipid II flippase MurJ bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
integral membrane protein MviN
PLM4_65_coex_sep16_scaffold_20_2
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

614..2296
DNA (1683bp) protein (561aa)
Elongation factor 4 {ECO:0000313|EMBL:KKT28571.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
Elongation factor 4 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
LepA; GTP-binding protein LepA
PLM4_65_coex_sep16_scaffold_20_3
R_OD1_Yanofskybacteria_41_29, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

2428..2793
DNA (366bp) protein (122aa)
id=1924269 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_29_curated
PLM4_65_coex_sep16_scaffold_20_trna_1
unknown

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2886..2956
DNA (71bp)
transferRNA Gly
PLM4_65_coex_sep16_scaffold_20_trna_2
unknown

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2968..3039
DNA (72bp)
transferRNA Thr
PLM4_65_coex_sep16_scaffold_20_4
GWA2_OD1_44_9, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

3511..4266
DNA (756bp) protein (252aa)
Peptide chain release factor 2 {ECO:0000313|EMBL:KKT82388.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_9.;"
Peptide chain release factor 2, RF-2 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
peptide chain release factor 2
PLM4_65_coex_sep16_scaffold_20_5
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

4341..5024
DNA (684bp) protein (228aa)
Predicted ATPase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
ftsE; cell division ATP-binding protein FtsE
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
PLM4_65_coex_sep16_scaffold_20_6
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

5046..5957
DNA (912bp) protein (304aa)
Uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
cell division protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
PLM4_65_coex_sep16_scaffold_20_trna_3
unknown

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6029..6099
DNA (71bp)
transferRNA Gln
PLM4_65_coex_sep16_scaffold_20_7

Not on your lists

6205..6636
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN67599.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_coex_sep16_scaffold_20_8
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6647..7849
DNA (1203bp) protein (401aa)
HNH endonuclease Tax=Bacillus cereus BGSC 6E1 RepID=C2NDH1_BACCE
HNH endonuclease {ECO:0000313|EMBL:EEK57971.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BGSC 6E1.;"
DNA helicase
PLM4_65_coex_sep16_scaffold_20_9
unknown

Not on your lists

comp(9836..10540)
DNA (705bp) protein (235aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI000381366A
PLM4_65_coex_sep16_scaffold_20_10

Not on your lists

comp(10540..10860)
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6PXT0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH99739.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PLM4_65_coex_sep16_scaffold_20_11
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

11406..11831
DNA (426bp) protein (142aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
PLM4_65_coex_sep16_scaffold_20_12
R_RIF_OD1_07_48_27b, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

11931..12425
DNA (495bp) protein (165aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000371892C
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_48_27b_curated
PLM4_65_coex_sep16_scaffold_20_13
R_RIF_OD1_13_51_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

12432..13214
DNA (783bp) protein (261aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037B95B7
cytochrome c biogenesis transmembrane protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_13_51_17_curated
PLM4_65_coex_sep16_scaffold_20_14
R_RIF_OD1_13_51_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

13222..13743
DNA (522bp) protein (174aa)
Putative uncharacterized protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_13_51_17_curated
PLM4_65_coex_sep16_scaffold_20_15
R_RIF_OD1_13_51_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

13733..14146
DNA (414bp) protein (138aa)
VKORC1/thioredoxin domain protein bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_13_51_17_curated
PLM4_65_coex_sep16_scaffold_20_16
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

14158..15150
DNA (993bp) protein (331aa)
Putative uncharacterized protein bin=GWC2_OD1_43_27 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
PLM4_65_coex_sep16_scaffold_20_17
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

15204..16382
DNA (1179bp) protein (393aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2AB64_9BACT
Methyltransferase, cyclopropane fatty acid synthase
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
PLM4_65_coex_sep16_scaffold_20_18
R_OD1_40_30, Parcubacteria, Bacteria

Not on your lists

16400..18451
DNA (2052bp) protein (684aa)
ttr:Tter_2584 copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cation transporting ATPase, E1-E2 family
Tax=RIFCSPHIGHO2_01_FULL_OD1_40_30_curated
PLM4_65_coex_sep16_scaffold_20_19
R_OD1_Wolfebacteria_45_10c, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

18534..18734
DNA (201bp) protein (67aa)
transmembrane_regions bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_45_10c_curated
PLM4_65_coex_sep16_scaffold_20_20
R_OD1_Giovannonibacteria_44_11, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

18884..20836
DNA (1953bp) protein (651aa)
peptidase M13
Metalloendopeptidase PepO bin=GWF2_Bacteroidetes_38_335 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Tax=RIFCSPHIGHO2_02_FULL_OD1_Giovannonibacteria_44_11_curated
PLM4_65_coex_sep16_scaffold_20_21
R_OD1_Yanofskybacteria_39_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

20993..21760
DNA (768bp) protein (256aa)
hypothetical protein SghaA1_21382 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF0DCB bin=ACD81 species=Streptomyces ghanaensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_39_10_curated
PLM4_65_coex_sep16_scaffold_20_22
RHI_OD1_43_12, Parcubacteria, Bacteria

Not on your lists

22011..23171
DNA (1161bp) protein (387aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit Tax=uncultured bacterium RepID=K2FKW9_9BACT
Tax=RIFCSPHIGHO2_12_FULL_OD1_43_12_curated
PLM4_65_coex_sep16_scaffold_20_23
RLO_OD1_60_15, Parcubacteria, Bacteria

Not on your lists

23173..23391
DNA (219bp) protein (73aa)
coiled-coil 42..70 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFCSPLOWO2_12_FULL_OD1_60_15_curated
PLM4_65_coex_sep16_scaffold_20_24
unknown

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23407..23688
DNA (282bp) protein (94aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_20_25
unknown

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23781..24002
DNA (222bp) protein (74aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_20_26
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24285..24830
DNA (546bp) protein (182aa)
hypothetical protein Tax=Bacillus sp. 37MA RepID=UPI00036053CF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ11867.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
PLM4_65_coex_sep16_scaffold_20_27
R_RIF_OD1_13_47_10, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


24827..25159
DNA (333bp) protein (111aa)
Methionine--tRNA ligase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
nucleotide-binding protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_47_10_curated
Displaying items 1-30 of 144 in total

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