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S_p1_S3_coassembly_k141_623433

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_623433_1

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41..1141
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037D50AB
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:KHO50625.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
putative high-affinity branched-chain amino acid ABC transporter amino acid-binding protein
S_p1_S3_coassembly_k141_623433_2
Parcubacteria bacterium GW2011_GWB1_42_9, Parcubacteria, Bacteria

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comp(1142..1702)
DNA (561bp) protein (187aa)
Elongation factor P {ECO:0000313|EMBL:KKS76777.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_9.;"
efp; elongation factor P; K02356 elongation factor P bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
elongation factor P
S_p1_S3_coassembly_k141_623433_3
GWF2_OD1_38_76, Parcubacteria, Bacteria

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1768..2358
DNA (591bp) protein (197aa)
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KKQ81973.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_76.;"
RNA polymerase, sigma-24 subunit, ECF subfamily protein bin=GWC2_OD1_43_27 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
rpoE; RNA polymerase sigma-70 factor, ECF family protein
S_p1_S3_coassembly_k141_623433_4
RIFOXYD2_FULL_OD1_52_8_curated, Parcubacteria, Bacteria

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2355..2702
DNA (348bp) protein (116aa)
Tax=RIFOXYD2_FULL_OD1_52_8_curated
S_p1_S3_coassembly_k141_623433_5
RIFOXYD1_FULL_OD1_46_19_curated, Parcubacteria, Bacteria

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comp(2656..3690)
DNA (1035bp) protein (345aa)
Uncharacterized protein Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZW1_9BACT
recA; recombinase A
Tax=RIFOXYD1_FULL_OD1_46_19_curated
S_p1_S3_coassembly_k141_623433_6
GWA1_OD1_40_21, Parcubacteria, Bacteria

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comp(3683..4000)
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR53831.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
seg bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
S_p1_S3_coassembly_k141_623433_7
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

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comp(4019..6268)
DNA (2250bp) protein (750aa)
ftsK; cell division protein ftsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell division FtsK/SpoIIIE
Tax=GWA1_OD1_51_14_curated
S_p1_S3_coassembly_k141_623433_8
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

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6285..6911
DNA (627bp) protein (209aa)
id=3634406 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=GWA1_OD1_51_14_curated
S_p1_S3_coassembly_k141_623433_9
GWB1_OD1_45_9, Parcubacteria, Bacteria

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7160..9310
DNA (2151bp) protein (717aa)
Serine-rich repeat adhesion glycoprotein {ECO:0000313|EMBL:KKU15047.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_45_9.;"
Putative uncharacterized protein TPHA0C00840 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
KxYKxGKxW signal peptide domain protein
S_p1_S3_coassembly_k141_623433_10
GWA1_OD1_47_8, Parcubacteria, Bacteria

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9521..10201
DNA (681bp) protein (227aa)
Transposase Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVD7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU81581.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_8.;"
hypothetical protein
S_p1_S3_coassembly_k141_623433_11
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

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10252..11268
DNA (1017bp) protein (339aa)
Tax=GWA1_OD1_51_14_curated
S_p1_S3_coassembly_k141_623433_12
Parcubacteria bacterium GW2011_GWB1_42_9, Parcubacteria, Bacteria

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11352..12257
DNA (906bp) protein (302aa)
PKD domain containing protein {ECO:0000313|EMBL:KKS77792.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_9.;"
Predicted protein bin=GWA1_ZB2_49_26 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
S_p1_S3_coassembly_k141_623433_13
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

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12473..12946
DNA (474bp) protein (158aa)
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L10
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S_p1_S3_coassembly_k141_623433_14
GWB1_OD1_44_7, Parcubacteria, Bacteria

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12949..13326
DNA (378bp) protein (126aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003708049
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:KKT75536.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_44_7.;"
50S ribosomal protein L7/L12
S_p1_S3_coassembly_k141_623433_15
RLO_RIF03_38_15, RIF3, Bacteria

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13326..13850
DNA (525bp) protein (175aa)
hypothetical protein bin=bin3_NC10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
S_p1_S3_coassembly_k141_623433_16
unknown

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comp(13928..14422)
DNA (495bp) protein (165aa)

This feature has no annotations

S_p1_S3_coassembly_k141_623433_17
RIFOXYD1_FULL_OD1_44_32_curated, Parcubacteria, Bacteria

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14556..15131
DNA (576bp) protein (192aa)
id=5226870 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYD1_FULL_OD1_44_32_curated
S_p1_S3_coassembly_k141_623433_18
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

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15208..15921
DNA (714bp) protein (238aa)
small-conductance mechanosensitive ion channel bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cmpX; CmpX protein
Tax=GWA1_OD1_51_14_curated
Displaying 18 items

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