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S_p1_S3_coassembly_k141_1683385

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1683385_1
GWA2_OD1_45_9, Jorgensenbacteria, Parcubacteria, Bacteria

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2..199
DNA (198bp) protein (66aa)
Cro/Cl family transcriptional regulator Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B2FAFB
Transcriptional regulator, XRE family {ECO:0000313|EMBL:KKU15862.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_9.;"
regulatory protein
S_p1_S3_coassembly_k141_1683385_2
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

202..1014
DNA (813bp) protein (271aa)
DNA modification methylase Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GYY5_UNCTG bin=GWF1_OP11_31_35_complete species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Modification methylase protein {ECO:0000313|EMBL:KKR53884.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
DNA modification methylase
S_p1_S3_coassembly_k141_1683385_3
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

1011..1631
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=E3ESL1_HYDTT bin=GWF1_OP11_31_35_complete species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Uncharacterized protein {ECO:0000313|EMBL:KKR53885.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
hypothetical protein
S_p1_S3_coassembly_k141_1683385_4

Not on your lists

1635..3509
DNA (1875bp) protein (625aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2A6K0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD51863.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SMC protein-like protein
S_p1_S3_coassembly_k141_1683385_trna_1
unknown

Not on your lists

3918..3990
DNA (73bp)
transferRNA Val
S_p1_S3_coassembly_k141_1683385_5
GWC1_OD1_35_31, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists


3998..5254
DNA (1257bp) protein (419aa)
hypothetical protein; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp {ECO:0000313|EMBL:KKP76895.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbellbacteria) bacterium GW2011_GWC1_35_31.;"
hypothetical protein
S_p1_S3_coassembly_k141_1683385_6
GWC2_RIF_OD1_13_49_10_curated, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


5279..7468
DNA (2190bp) protein (730aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000361784C
Tax=GWC2_RIF_OD1_13_49_10_curated
S_p1_S3_coassembly_k141_1683385_7
RIFOXYD1_FULL_OD1_44_32_curated, Parcubacteria, Bacteria

Not on your lists

7453..8223
DNA (771bp) protein (257aa)
putative protease (EC:3.4.-.-)
Putative uncharacterized protein bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYD1_FULL_OD1_44_32_curated
S_p1_S3_coassembly_k141_1683385_8
RIFOXYD1_FULL_OD1_46_19_curated, Parcubacteria, Bacteria

Not on your lists

8187..8657
DNA (471bp) protein (157aa)
Protein containing Heat shock protein Hsp20 domain bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Small heat shock protein
Tax=RIFOXYD1_FULL_OD1_46_19_curated
S_p1_S3_coassembly_k141_1683385_trna_4
unknown

Not on your lists

comp(8711..8783)
DNA (73bp)
transferRNA Phe
S_p1_S3_coassembly_k141_1683385_9

Not on your lists

comp(8794..9048)
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW23364.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_51_35.;"
S_p1_S3_coassembly_k141_1683385_10
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9054..9299)
DNA (246bp) protein (82aa)
hypothetical protein Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI00035CE8B7
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
S_p1_S3_coassembly_k141_1683385_trna_3
unknown

Not on your lists

comp(9397..9468)
DNA (72bp)
transferRNA Arg
S_p1_S3_coassembly_k141_1683385_11
R_OD1_Nomurabacteria_39_17, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9472..9726)
DNA (255bp) protein (85aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000371DA57
glutaredoxin-like protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_39_17_curated
S_p1_S3_coassembly_k141_1683385_trna_2
unknown

Not on your lists

comp(9747..9817)
DNA (71bp)
transferRNA Gly
S_p1_S3_coassembly_k141_1683385_12
R_OD1_Giovannonibacteria_46_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(9775..10059)
DNA (285bp) protein (95aa)
GIY-YIG catalytic domain protein Tax=delta proteobacterium NaphS2 RepID=D8EY61_9DELT
excinuclease ABC C subunit domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_32_curated
S_p1_S3_coassembly_k141_1683385_13
RIFOXYD2_FULL_RIF_OD1_11_36_9_curated, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10170..10547)
DNA (378bp) protein (126aa)
hypothetical protein bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Tax=RIFOXYD2_FULL_RIF_OD1_11_36_9_curated
S_p1_S3_coassembly_k141_1683385_14
unknown

Not on your lists

10571..10681
DNA (111bp) protein (37aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1683385_15

Not on your lists

comp(10657..12441)
DNA (1785bp) protein (595aa)
Elongation factor 4 {ECO:0000313|EMBL:KKW07869.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_49_16.;"
GTP-binding protein LepA bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
lepA; GTP-binding protein LepA
S_p1_S3_coassembly_k141_1683385_16
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(12451..14355)
DNA (1905bp) protein (635aa)
Cysteine-rich repeat protein bin=GWA2_OP3_53_43 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
guxA1; cellulose 1,4-beta-cellobiosidase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
S_p1_S3_coassembly_k141_1683385_17
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(14365..24780)
DNA (10416bp) protein (3472aa)
Uncharacterized protein Tax=Polysphondylium pallidum RepID=D3BGN6_POLPA
fibronectin type III protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
S_p1_S3_coassembly_k141_1683385_18
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(24970..25758)
DNA (789bp) protein (263aa)
hypothetical protein Tax=Robiginitomaculum antarcticum RepID=UPI0003823A94
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
S_p1_S3_coassembly_k141_1683385_19
RIFOXYD1_FULL_OD1_46_19_curated, Parcubacteria, Bacteria

Not on your lists

comp(25789..27468)
DNA (1680bp) protein (560aa)
hypothetical protein; K03980 virulence factor bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Tax=RIFOXYD1_FULL_OD1_46_19_curated
S_p1_S3_coassembly_k141_1683385_20

Not on your lists

comp(28052..30355)
DNA (2304bp) protein (768aa)
Ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:KKS88664.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_11b.;"
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Ribonucleoside-triphosphate reductase
S_p1_S3_coassembly_k141_1683385_21
RLO_RIF_OD1_10_39_16, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(30437..31222)
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CRH4_9BACT
glucokinase
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated
S_p1_S3_coassembly_k141_1683385_22
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(31215..32174)
DNA (960bp) protein (320aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase bin=GWA1_ZB2_49_26 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
S_p1_S3_coassembly_k141_1683385_23
unknown

Not on your lists

32286..32591
DNA (306bp) protein (102aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1683385_24
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

comp(32682..32963)
DNA (282bp) protein (94aa)
RNA recognition motif-containing protein {ECO:0000313|EMBL:KKW48058.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
rnp-1 like RNA-binding protein bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
RNP-1 like RNA-binding protein
S_p1_S3_coassembly_k141_1683385_25
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(33121..34314)
DNA (1194bp) protein (398aa)
tpt:Tpet_0442 tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
S_p1_S3_coassembly_k141_1683385_26

Not on your lists

comp(34729..35790)
DNA (1062bp) protein (354aa)
hypothetical protein bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD86563.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 31 in total

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