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S_p1_S3_coassembly_k141_420782

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_420782_1
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

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2..922
DNA (921bp) protein (307aa)
rod shape-determining protein RodA; K05837 rod shape determining protein RodA bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
mrdB; rod shape-determining protein RodA
Tax=GWE1_Berkelbacteria_39_12
S_p1_S3_coassembly_k141_420782_2
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

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1002..1271
DNA (270bp) protein (90aa)
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
rplU; 50S ribosomal protein L21
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
S_p1_S3_coassembly_k141_420782_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1268..1465
DNA (198bp) protein (66aa)
Preprotein translocase, SecE subunit bin=GWC2_Methylomirabilis_70_16 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
preprotein translocase subunit SecE
Tax=GWC2_Rokubacteria_70_16_curated
S_p1_S3_coassembly_k141_420782_4
Berkelbacteria bacterium GW2011_GWB1_38_5, Berkelbacteria, Bacteria

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1467..2057
DNA (591bp) protein (197aa)
Transcription antitermination protein nusG bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
Transcription antitermination protein nusG {ECO:0000313|EMBL:KKQ72546.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWB1_38_5.;"
nusG; transcription antitermination factor
S_p1_S3_coassembly_k141_420782_5
CG_CPR15_01, CG_CPR15, Bacteria

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2135..2554
DNA (420bp) protein (140aa)
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplK; 50S ribosomal protein L11
Tax=CG_CPR15_01
S_p1_S3_coassembly_k141_420782_6
unknown

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comp(2743..3129)
DNA (387bp) protein (129aa)

This feature has no annotations

S_p1_S3_coassembly_k141_420782_7
unknown

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comp(3126..3407)
DNA (282bp) protein (94aa)

This feature has no annotations

S_p1_S3_coassembly_k141_420782_8
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

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3561..4421
DNA (861bp) protein (287aa)
DNA protecting protein DprA bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
putative DNA processing protein
Tax=GWE1_Berkelbacteria_39_12
S_p1_S3_coassembly_k141_420782_9

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4399..6294
DNA (1896bp) protein (632aa)
ttr:Tter_0485 DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DNA topoisomerase I (EC:5.99.1.2)
Displaying 9 items

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