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S_p1_S3_coassembly_k141_433584

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_433584_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

S_p1_S3_coassembly_k141_433584_2
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists

comp(55..1326)
DNA (1272bp) protein (424aa)
Peptidase M16 domain protein bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
peptidase M16 domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
S_p1_S3_coassembly_k141_433584_3
unknown

Not on your lists

comp(1360..1575)
DNA (216bp) protein (72aa)

This feature has no annotations

S_p1_S3_coassembly_k141_433584_4
unknown

Not on your lists

comp(1572..2516)
DNA (945bp) protein (315aa)

This feature has no annotations

S_p1_S3_coassembly_k141_433584_5

Not on your lists

comp(2509..3144)
DNA (636bp) protein (212aa)
Putative uncharacterized protein bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKR03586.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_13b.;"
hypothetical protein
S_p1_S3_coassembly_k141_433584_6
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists

comp(3141..3698)
DNA (558bp) protein (186aa)
ybjG; putative undecaprenyl-diphosphatase YbjG (EC:3.6.1.27) bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
bcrC; undecaprenyl-diphosphatase BcrC (EC:3.6.1.27)
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
S_p1_S3_coassembly_k141_433584_7
GWA1_Berkelbacteria_39_10_partial, Berkelbacteria, Bacteria

Not on your lists

3788..4741
DNA (954bp) protein (318aa)
Integrase-recombinase {ECO:0000313|EMBL:KKQ90358.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_39_10.;"
Tyrosine recombinase XerC bin=GWC2_CPR2_39_35 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWC2_CPR2_39_35 organism_group=CPR2 organism_desc=Candidate for curation
Tyrosine recombinase XerD
S_p1_S3_coassembly_k141_433584_8
R_OP11_Levybacteria_41_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

4744..5664
DNA (921bp) protein (307aa)
GTP-binding protein Tax=Mobiluncus mulieris RepID=C2KTB2_9ACTO bin=GWF1_OP11_31_35_complete species=Mobiluncus mulieris genus=Mobiluncus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
ychF; GTP-dependent nucleic acid-binding protein EngD
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_41_15_curated
S_p1_S3_coassembly_k141_433584_9
RLO_OD1_60_15, Parcubacteria, Bacteria

Not on your lists

comp(5619..5795)
DNA (177bp) protein (59aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000363B5ED
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_60_15_curated
S_p1_S3_coassembly_k141_433584_10
R_OD1_48_18, Parcubacteria, Bacteria

Not on your lists

comp(5801..6253)
DNA (453bp) protein (151aa)
PEBP family protein; K06910 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_48_18_curated
S_p1_S3_coassembly_k141_433584_11
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists


6304..6729
DNA (426bp) protein (142aa)
30S ribosomal protein S6 {ECO:0000313|EMBL:KKQ18677.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
TonB family C-terminal domain protein bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
rpsF; 30S ribosomal protein S6
S_p1_S3_coassembly_k141_433584_12
Berkelbacteria bacterium GW2011_GWB1_38_5, Berkelbacteria, Bacteria

Not on your lists

6733..7239
DNA (507bp) protein (169aa)
Single-stranded DNA-binding protein bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KKQ73659.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWB1_38_5.;"
hypothetical protein
S_p1_S3_coassembly_k141_433584_13

Not on your lists

7546..7962
DNA (417bp) protein (139aa)
hypothetical protein cdiviTM7_02774 Tax=candidate division TM7 RepID=UPI00016B269D bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56847.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S_p1_S3_coassembly_k141_433584_14
GWB1_OP11_44_6, Collierbacteria, Microgenomates, Bacteria

Not on your lists

7978..8226
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT71638.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB1_44_6.;"
S_p1_S3_coassembly_k141_433584_15
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists

comp(8252..9874)
DNA (1623bp) protein (541aa)
60 kDa chaperonin bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
groL; chaperonin GroL
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
S_p1_S3_coassembly_k141_433584_16
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists

comp(9927..10214)
DNA (288bp) protein (96aa)
10 kDa chaperonin bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Chaperonin Cpn10
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
S_p1_S3_coassembly_k141_433584_17
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

comp(10370..11020)
DNA (651bp) protein (217aa)
Uncharacterized protein bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
hypothetical protein
Tax=RBG_13_Berkelbacteria_40_8_curated
S_p1_S3_coassembly_k141_433584_18
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

11079..12044
DNA (966bp) protein (322aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035FD2BB
Tax=RBG_13_RIF_OD1_08_37_53_curated
S_p1_S3_coassembly_k141_433584_19
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12213..13484)
DNA (1272bp) protein (424aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2G5I5_9BACT
manB; phosphomannomutase
Tax=CG_Desulfob_01
Displaying 19 items

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