ggKbase home page

07M_4_2014_scaffold_8803

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_8803_1
CG_CPR03_01, CG_CPR03, Bacteria

Not on your lists

89..895
DNA (807bp) protein (269aa)
Putative uncharacterized protein id=4209263 bin=GWC2_Bacteroidetes_40_22 species=Dictyostelium discoideum genus=Dictyostelium taxon_order=Dictyosteliida taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
Tax=CG_CPR03_01
07M_4_2014_scaffold_8803_2

Not on your lists

906..1895
DNA (990bp) protein (330aa)
Glycoprotein gp2 {ECO:0000313|EMBL:KKT26989.1}; TaxID=1618828 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_9b.;"
hypothetical protein id=5803292 bin=OD1_GWC2_34_28 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
07M_4_2014_scaffold_8803_3
R_OD1_Nomurabacteria_40_20, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2033..2272
DNA (240bp) protein (80aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_40_20_curated
07M_4_2014_scaffold_8803_4
R_RIF_OD1_13_49_12, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

2269..2523
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000365D177
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_49_12_curated
07M_4_2014_scaffold_8803_5

Not on your lists

2538..3086
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWT6_9BACT
Trigger factor {ECO:0000313|EMBL:KKS57811.1}; TaxID=1618823 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_35.;"
07M_4_2014_scaffold_8803_6
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

3080..3472
DNA (393bp) protein (131aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000313|EMBL:KKU52603.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
ATP-dependent Clp protease proteolytic subunit id=2824034 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
07M_4_2014_scaffold_8803_7
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(3473..5101)
DNA (1629bp) protein (543aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase id=3736606 bin=GWC2_OD1_43_27 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
07M_4_2014_scaffold_8803_8

Not on your lists

5245..6774
DNA (1530bp) protein (510aa)
Ribonuclease Y {ECO:0000313|EMBL:KKR47913.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
phosphodiesterase; K06950 uncharacterized protein id=5803143 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
2,3 cyclic-nucleotide 2-phosphodiesterase
07M_4_2014_scaffold_8803_9
R_RIF_OD1_11_45_15b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6859..7131
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY42_9BACT
nucleoid DNA-binding protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_11_45_15b_curated
07M_4_2014_scaffold_8803_10
R_RIF_OD1_09_41_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(7305..7775)
DNA (471bp) protein (157aa)
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein id=5227107 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
MgtC family protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_41_20_curated
07M_4_2014_scaffold_8803_11
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(7782..8441)
DNA (660bp) protein (220aa)
rnhB; ribonuclease HII (EC:3.1.26.4) id=15189696 bin=GWB1_SUB10_ACD81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Ribonuclease H (EC:3.1.26.4)
Tax=CG_Wolfe_01
07M_4_2014_scaffold_8803_12

Not on your lists

8564..8992
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GBE6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE20395.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
07M_4_2014_scaffold_8803_13
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

9626..10612
DNA (987bp) protein (329aa)
RNA-directed DNA polymerase id=4530225 bin=GWF2_Firmicute_51_9 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWF2_Firmicute_51_9 organism_group=Firmicute
RNA-directed DNA polymerase
Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
07M_4_2014_scaffold_8803_14

Not on your lists

10638..12389
DNA (1752bp) protein (584aa)
Threonyl-tRNA synthetase, threonyl-tRNA synthetase {ECO:0000313|EMBL:KKS92449.1}; EC=6.1.1.3 {ECO:0000313|EMBL:KKS92449.1};; TaxID=1618909 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_12.;"
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2EBM7_9BACT rbh
07M_4_2014_scaffold_8803_trna_2
unknown

Not on your lists

comp(12397..12467)
DNA (71bp)
transferRNA Pro
07M_4_2014_scaffold_8803_trna_1
unknown

Not on your lists

comp(12563..12633)
DNA (71bp)
transferRNA Pro
Displaying 16 items

View Taxonomy