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07M_4_2014_scaffold_7039

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_7039_1
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

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146..418
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
07M_4_2014_scaffold_7039_2
unknown

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1129..1254
DNA (126bp) protein (42aa)

This feature has no annotations

07M_4_2014_scaffold_7039_3

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1960..2295
DNA (336bp) protein (112aa)
Marine sediment metagenome DNA, contig: S06H3_L05177 {ECO:0000313|EMBL:GAI02723.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Glycine-rich RNA-binding protein GRP1A id=3012495 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rbpA; RNA-binding protein
07M_4_2014_scaffold_7039_4
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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2419..2943
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI000363F762
sigW; RNA polymerase sigma factor SigW
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_7039_5
GWC1_OD1_50_9, Adlerbacteria, Parcubacteria, Bacteria

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3106..3558
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI000368DED7
Uncharacterized protein {ECO:0000313|EMBL:KKW18591.1}; TaxID=1618608 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Adlerbacteria) bacterium GW2011_GWC1_50_9.;"
07M_4_2014_scaffold_7039_6
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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3577..5406
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YFD8_9BACT rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KKW21969.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
RND family efflux transporter MFP subunit
07M_4_2014_scaffold_7039_7
R_OD1_Azambacteria_44_14, Azambacteria, Parcubacteria, Bacteria

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5411..6127
DNA (717bp) protein (239aa)
ABC-type transport system id=4731803 bin=GWC2_OD1_43_27 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) rbh
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_OD1_Azambacteria_44_14_curated
07M_4_2014_scaffold_7039_8
GWF2_OD1_42_19, Giovannonibacteria, Parcubacteria, Bacteria

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6141..7358
DNA (1218bp) protein (406aa)
ABC transporter, permease protein {ECO:0000313|EMBL:KKS48442.1}; TaxID=1618659 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWF2_42_19.;"
ABC transporter, permease protein id=4731804 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) rbh
ABC-type antimicrobial peptide transport system, permease component rbh
07M_4_2014_scaffold_7039_9
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

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7741..8064
DNA (324bp) protein (108aa)
Tax=RBG_16_OP11_Woesebacteria_34_12_curated
Displaying 9 items

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