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07M_4_2014_scaffold_1291

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_1291_1
R_OD1_Uhrbacteria_49_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

3..278
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000371A360
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_49_11_curated
07M_4_2014_scaffold_1291_2
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(351..956)
DNA (606bp) protein (202aa)
ATP-dependent Clp protease proteolytic subunit id=4621402 bin=GWA2_CPR4_42_17 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
ATP-dependent Clp protease, proteolytic subunit ClpP
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_1291_3
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(985..2016)
DNA (1032bp) protein (344aa)
tig; trigger factor (EC:5.2.1.8); K03545 trigger factor id=5227363 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
tig; trigger factor Tig (EC:5.2.1.8)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
07M_4_2014_scaffold_1291_4
unknown

Not on your lists

comp(2044..3411)
DNA (1368bp) protein (456aa)

This feature has no annotations

07M_4_2014_scaffold_1291_5
unknown

Not on your lists

comp(3448..3879)
DNA (432bp) protein (144aa)

This feature has no annotations

07M_4_2014_scaffold_1291_trna_1
unknown

Not on your lists

3972..4042
DNA (71bp)
transferRNA Ala
07M_4_2014_scaffold_1291_6
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(4071..5135)
DNA (1065bp) protein (355aa)
D-alanine-D-alanine ligase id=2663253 bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
D-alanine-D-alanine ligase
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
07M_4_2014_scaffold_1291_7
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

5386..5688
DNA (303bp) protein (101aa)
RNP-1 like RNA-binding protein id=4790036 bin=GWC2_OD1_43_27 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RNP-1 like RNA-binding protein
Tax=CG_CPR04_01
07M_4_2014_scaffold_1291_8
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

5806..6534
DNA (729bp) protein (243aa)
DSBA oxidoreductase id=5803654 bin=OD1_GWC2_34_28 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Sodium/proton antiporter
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_1291_9
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(6619..7548)
DNA (930bp) protein (310aa)
Thioredoxin-disulfide reductase (EC:1.8.1.9)
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain-containing protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I9DL68_9FIRM
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_1291_trna_2
unknown

Not on your lists

7604..7675
DNA (72bp)
transferRNA Val
07M_4_2014_scaffold_1291_10
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

7634..8455
DNA (822bp) protein (274aa)
ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=5803270 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
pseudouridine synthase
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
07M_4_2014_scaffold_1291_11
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists


8459..8872
DNA (414bp) protein (138aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=5803271 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
LSU ribosomal protein L19P
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_1291_trna_3
unknown

Not on your lists

8837..8920
DNA (84bp)
transferRNA Leu
07M_4_2014_scaffold_1291_12
unknown

Not on your lists

9082..9726
DNA (645bp) protein (215aa)

This feature has no annotations

07M_4_2014_scaffold_1291_13
Fervidobacterium pennivorans, Fervidobacterium, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

9777..10046
DNA (270bp) protein (90aa)
Glutaredoxin-like protein, YruB-family n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UCN4_FERPD
glutaredoxin-like protein, YruB-family
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:AFG35277.1}; TaxID=771875 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacterium.;" source="Fervidobacterium pennivorans (strain DSM 9078 / Ven5).;"
07M_4_2014_scaffold_1291_trna_4
unknown

Not on your lists

10054..10125
DNA (72bp)
transferRNA Arg
07M_4_2014_scaffold_1291_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10226..10939
DNA (714bp) protein (238aa)
Uridylate kinase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E2Y0_DICTD
uridylate kinase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
07M_4_2014_scaffold_1291_trna_5
unknown

Not on your lists

11019..11089
DNA (71bp)
transferRNA Ala
07M_4_2014_scaffold_1291_15

Not on your lists

comp(11185..12204)
DNA (1020bp) protein (340aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ96798.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
07M_4_2014_scaffold_1291_16

Not on your lists

comp(12201..13139)
DNA (939bp) protein (313aa)
Tyrosine recombinase XerC {ECO:0000313|EMBL:KKS34364.1}; TaxID=1618927 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_13.;"
recombinase; K04763 integrase/recombinase XerD id=5803170 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative Tyrosine recombinase xerD
07M_4_2014_scaffold_1291_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

13410..14174
DNA (765bp) protein (255aa)
SPFH domain, Band 7 family protein id=14625744 bin=bin7_NC10_sister species=Singularimonas variicoloris genus=Singularimonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
Displaying 22 items

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