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07M_4_2014_scaffold_1400

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_1400_1
GWB1_OD1_40_14, Parcubacteria, Bacteria

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1..1806
DNA (1806bp) protein (602aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003738577
Cell surface protein {ECO:0000313|EMBL:KKR47176.1}; TaxID=1618865 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_40_14.;"
hypothetical protein
07M_4_2014_scaffold_1400_2
unknown

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1894..2667
DNA (774bp) protein (258aa)

This feature has no annotations

07M_4_2014_scaffold_1400_3
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

2750..5548
DNA (2799bp) protein (933aa)
id=5227330 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
07M_4_2014_scaffold_1400_4
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(5804..6814)
DNA (1011bp) protein (337aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C239_THEGP
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_1400_5
R_RIF_OD1_13_59_16, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

6931..7572
DNA (642bp) protein (214aa)
Putative uncharacterized protein id=2192944 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
polysaccharide synthesis protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_59_16_curated
07M_4_2014_scaffold_1400_6
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

7569..8618
DNA (1050bp) protein (350aa)
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] id=5803572 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Polymerase III, gamma and tau subunit protein {ECO:0000313|EMBL:KKS11073.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
DNA polymerase III subunit gamma and tau
07M_4_2014_scaffold_1400_trna_1
unknown

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8634..8704
DNA (71bp)
transferRNA Gln
07M_4_2014_scaffold_1400_7
R_RIF_OD1_13_59_16, RIF-OD1-13, Parcubacteria, Bacteria

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8758..9258
DNA (501bp) protein (167aa)
Peptidyl-prolyl cis-trans isomerase id=3297980 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
FKBP-type peptidylprolyl cis-trans isomerase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_59_16_curated
07M_4_2014_scaffold_1400_8
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

9402..9713
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000369925F
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
07M_4_2014_scaffold_1400_9
GWF2_OD1_37_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

9840..10499
DNA (660bp) protein (220aa)
tRNA (Guanine-N(1)-)-methyltransferase {ECO:0000313|EMBL:KKQ40285.1}; TaxID=1618725 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_37_7.;"
tRNA (guanine-N(1)-)-methyltransferase id=3012533 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
trmD; tRNA (guanine-N(1)-)-methyltransferase
07M_4_2014_scaffold_1400_10
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

10512..11432
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FIS9_9BACT
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_1400_11
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

11487..12548
DNA (1062bp) protein (354aa)
id=2824537 bin=GWC1_OD1_38_17 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_1400_12
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

12545..13513
DNA (969bp) protein (323aa)
Beta-glucosidase id=4838949 bin=GWC2_OD1_43_27 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
beta-glucosidase
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
Displaying 13 items

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