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bjp_ig2599_scaffold_5456

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_5456_1
GWF2_OD1_40_10, Parcubacteria, Bacteria

Not on your lists

1..768
DNA (768bp) protein (256aa)
Preprotein translocase subunit YidC Tax=GWF2_OD1_40_10
60 kDa inner membrane insertion protein; K03217 preprotein translocase subunit YidC id=5803200 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
YidC; preprotein translocase subunit YidC
bjp_ig2599_scaffold_5456_2
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

719..1183
DNA (465bp) protein (155aa)
RNA-binding protein Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
single-stranded nucleic acid binding R3H; K06346 spoIIIJ-associated protein id=5803199 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
jag; protein Jag
bjp_ig2599_scaffold_5456_3
RifOxyC12_full_RIF_OD1_09_46_25_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

1190..1666
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035F191A
hypothetical protein Tax=RifOxyC12_full_RIF_OD1_09_46_25_curated
bjp_ig2599_scaffold_5456_4
unknown

Not on your lists

1671..1982
DNA (312bp) protein (104aa)

This feature has no annotations

bjp_ig2599_scaffold_5456_5
CG_CPR03_01, CG_CPR03, Bacteria

Not on your lists

2173..2979
DNA (807bp) protein (269aa)
yapH; outer membrane autotransporter barrel (EC:3.4.-.-) Tax=CG_CPR03_01
Putative uncharacterized protein id=4209263 bin=GWC2_Bacteroidetes_40_22 species=Dictyostelium discoideum genus=Dictyostelium taxon_order=Dictyosteliida taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
bjp_ig2599_scaffold_5456_6

Not on your lists

2990..3979
DNA (990bp) protein (330aa)
Glycoprotein gp2 {ECO:0000313|EMBL:KKT26989.1}; TaxID=1618828 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_9b.;"
hypothetical protein id=5803292 bin=OD1_GWC2_34_28 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
bjp_ig2599_scaffold_5456_7
R_OD1_Nomurabacteria_40_20, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4117..4356
DNA (240bp) protein (80aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_40_20_curated
bjp_ig2599_scaffold_5456_8
R_RIF_OD1_13_49_12, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

4353..4607
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000365D177
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_49_12_curated
hypothetical protein
bjp_ig2599_scaffold_5456_9
R_OD1_Nomurabacteria_37_25, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4622..5335
DNA (714bp) protein (238aa)
trigger factor; K03545 trigger factor Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_37_25_curated
tig; trigger factor; K03545 trigger factor id=5803132 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
tig; trigger factor Tig
bjp_ig2599_scaffold_5456_10
Parcubacteria bacterium GW2011_GWE2_40_8, Parcubacteria, Bacteria

Not on your lists

5329..5910
DNA (582bp) protein (194aa)
ATP-dependent Clp protease, proteolytic subunit ClpP; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=15188807 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
ATP-dependent Clp protease proteolytic subunit {ECO:0000313|EMBL:KKR75694.1}; TaxID=1618951 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_40_8.;"
clpP; ATP-dependent Clp protease, proteolytic subunit ClpP
bjp_ig2599_scaffold_5456_11
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(5911..6954)
DNA (1044bp) protein (348aa)
gpmI; phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase id=3736606 bin=GWC2_OD1_43_27 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
bjp_ig2599_scaffold_5456_12
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(6951..7448)
DNA (498bp) protein (166aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1) Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
sti:Sthe_1664 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (EC:5.4.2.1); K01834 phosphoglycerate mutase [EC:5.4.2.1] id=95817 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
gpmI; phosphoglyceromutase (EC:5.4.2.1)
bjp_ig2599_scaffold_5456_13
Parcubacteria bacterium GW2011_GWE2_40_8, Parcubacteria, Bacteria

Not on your lists

7592..9121
DNA (1530bp) protein (510aa)
Ribonuclease Y {ECO:0000313|EMBL:KKR75692.1}; TaxID=1618951 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_40_8.;"
phosphodiesterase; K06950 uncharacterized protein id=5803143 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
2,3 cyclic-nucleotide 2-phosphodiesterase
bjp_ig2599_scaffold_5456_14
R_RIF_OD1_11_45_15b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9206..9478
DNA (273bp) protein (91aa)
Histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_11_45_15b_curated
Histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta id=5227367 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
nucleoid DNA-binding protein
bjp_ig2599_scaffold_5456_trna_1
unknown

Not on your lists

comp(9482..9552)
DNA (71bp)
transferRNA
bjp_ig2599_scaffold_5456_15
unknown

Not on your lists

comp(9641..9766)
DNA (126bp) protein (42aa)

This feature has no annotations

bjp_ig2599_scaffold_5456_16
R_RIF_OD1_09_41_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(9920..10390)
DNA (471bp) protein (157aa)
uncharacterized protein YhiD Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_41_20_curated
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein id=5227107 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
MgtC family protein
bjp_ig2599_scaffold_5456_17
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(10397..11056)
DNA (660bp) protein (220aa)
ribonuclease h (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Wolfe_01
rnhB; ribonuclease HII (EC:3.1.26.4) id=15189696 bin=GWB1_SUB10_ACD81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Ribonuclease H (EC:3.1.26.4)
bjp_ig2599_scaffold_5456_18

Not on your lists

11179..11556
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GBE6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE20395.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 19 items

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