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SR2-18-Sp2_coassembly_scaffold_200544

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-Sp2_coassembly_scaffold_200544_1

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230..595
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DGK5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE04896.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative UvrABC system protein A
SR2-18-Sp2_coassembly_scaffold_200544_2

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717..1262
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DGK5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE04896.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative UvrABC system protein A
SR2-18-Sp2_coassembly_scaffold_200544_3
Microgenomates bacterium GW2011_GWB1_44_8, Microgenomates, Bacteria

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comp(1257..1544)
DNA (288bp) protein (96aa)
Transcriptional regulator n=1 Tax=uncultured bacterium RepID=K2FV91_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKT77516.1}; TaxID=1618505 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_44_8.;"
HipB; putative transcriptional regulator
SR2-18-Sp2_coassembly_scaffold_200544_4
GWA1_OD1_49_11_partial, Parcubacteria, Bacteria

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comp(1557..1886)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E8Z1_9BACT
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:KKW02819.1}; TaxID=1618796 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_11.;"
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_200544_5
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

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comp(1914..3794)
DNA (1881bp) protein (627aa)
Chaperone protein DnaK {ECO:0000313|EMBL:KKS33246.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
dnaK; chaperone protein DnaK; K04043 molecular chaperone DnaK id=7067 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_200544_6
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

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comp(3796..4224)
DNA (429bp) protein (143aa)
Protein GrpE n=1 Tax=uncultured bacterium RepID=K2B119_9BACT
Protein GrpE {ECO:0000313|EMBL:KKS33245.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
Protein GrpE
SR2-18-Sp2_coassembly_scaffold_200544_7
R_OP11_Amesbacteria_48_32b, Amesbacteria, Microgenomates, Bacteria

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comp(4228..4959)
DNA (732bp) protein (244aa)
Transcriptional regulator of heat shock protein n=1 Tax=uncultured bacterium RepID=K2EAM3_9BACT
Heat-inducible transcription repressor hrcA
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32b_curated
SR2-18-Sp2_coassembly_scaffold_200544_8
GWC2_OP11_45_19, Amesbacteria, Microgenomates, Bacteria

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5028..6365
DNA (1338bp) protein (446aa)
Transcriptional regulator, AraC family n=1 Tax=uncultured bacterium RepID=K2A8Z0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU03108.1}; TaxID=1618366 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWC2_45_19.;"
SR2-18-Sp2_coassembly_scaffold_200544_9
RIFOXYD1_FULL_OP11_Woesebacteria_40_21_curated, Woesebacteria, Microgenomates, Bacteria

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6408..6587
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA255-J07 RepID=UPI000380DAF2
Tax=RIFOXYD1_FULL_OP11_Woesebacteria_40_21_curated
SR2-18-Sp2_coassembly_scaffold_200544_10
GWA1_OD1_49_11_partial, Parcubacteria, Bacteria

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6647..7510
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BKJ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW02690.1}; TaxID=1618796 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_11.;"
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_200544_11
GWC1_OP11_47_15, Amesbacteria, Microgenomates, Bacteria

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7583..10846
DNA (3264bp) protein (1088aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8J8_AMMDK id=5086734 bin=GWF1_OP11_31_35_complete species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKU65165.1}; TaxID=1618364 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWC1_47_15.;"
SR2-18-Sp2_coassembly_scaffold_200544_12
RIFOXYB1_FULL_OP11_Amesbacteria_44_23_curated, Amesbacteria, Microgenomates, Bacteria

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10833..14522
DNA (3690bp) protein (1230aa)
rpoC; DNA-directed RNA polymerase beta chain (RNAP beta subunit) (transcriptase beta chain) (RNA polymerase beta subunit) (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=7055 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFOXYB1_FULL_OP11_Amesbacteria_44_23_curated
SR2-18-Sp2_coassembly_scaffold_200544_13
R_OP11_Amesbacteria_48_32b, Amesbacteria, Microgenomates, Bacteria

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14509..14943
DNA (435bp) protein (145aa)
30S ribosomal protein S12 n=1 Tax=uncultured bacterium RepID=K2CDD2_9BACT
30S ribosomal protein S12
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32b_curated
SR2-18-Sp2_coassembly_scaffold_200544_14
RIFOXYB1_FULL_OP11_Amesbacteria_44_23_curated, Amesbacteria, Microgenomates, Bacteria

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14949..15425
DNA (477bp) protein (159aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=15191869 bin=GWC1_OP11_49_16_COMPLETE species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
rpsG; 30S ribosomal protein S7
Tax=RIFOXYB1_FULL_OP11_Amesbacteria_44_23_curated
SR2-18-Sp2_coassembly_scaffold_200544_15
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists


15437..16012
DNA (576bp) protein (192aa)
30S ribosomal protein S4 n=1 Tax=uncultured bacterium RepID=K2E5P3_9BACT
30S ribosomal protein S4 {ECO:0000313|EMBL:KKS32170.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
rpsD; 30S ribosomal protein S4
SR2-18-Sp2_coassembly_scaffold_200544_16
GWC1_OP11_46_24, Amesbacteria, Microgenomates, Bacteria

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16009..16923
DNA (915bp) protein (305aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=uncultured bacterium RepID=K2EVT0_9BACT
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKU31046.1}; TaxID=1618363 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWC1_46_24.;"
SR2-18-Sp2_coassembly_scaffold_200544_17
R_OP11_Amesbacteria_48_32b, Amesbacteria, Microgenomates, Bacteria

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16930..17310
DNA (381bp) protein (127aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 id=15191831 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
50S ribosomal protein L17
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32b_curated
SR2-18-Sp2_coassembly_scaffold_200544_18
GWC1_OP11_47_15, Amesbacteria, Microgenomates, Bacteria

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17307..17726
DNA (420bp) protein (140aa)
50S ribosomal protein L13 {ECO:0000313|EMBL:KKU65172.1}; TaxID=1618364 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWC1_47_15.;"
LSU ribosomal protein L13P; K02871 large subunit ribosomal protein L13 id=7025 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
rplM; 50S ribosomal protein L13
SR2-18-Sp2_coassembly_scaffold_200544_19
GWA1_OP11_48_9, Amesbacteria, Microgenomates, Bacteria

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17704..18111
DNA (408bp) protein (136aa)
30S ribosomal protein S9 {ECO:0000313|EMBL:KKW00365.1}; TaxID=1618355 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA1_48_9.;"
ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=7027 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
rpsI; 30S ribosomal protein S9
SR2-18-Sp2_coassembly_scaffold_200544_20
GWB1_OP11_47_19, Amesbacteria, Microgenomates, Bacteria

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comp(18114..18440)
DNA (327bp) protein (109aa)
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:KKU67491.1}; TaxID=1618360 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWB1_47_19.;"
seg 41..51 id=66907 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA polymerase beta domain-containing protein region
SR2-18-Sp2_coassembly_scaffold_200544_21
unknown

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comp(18475..18609)
DNA (135bp) protein (45aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_200544_trna_1
unknown

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comp(18794..18864)
DNA (71bp)
transferRNA Pro
SR2-18-Sp2_coassembly_scaffold_200544_22
GWA2_OP11_40_7b, Woesebacteria, Microgenomates, Bacteria

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18910..19158
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR74047.1}; TaxID=1618562 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA2_40_7.;"
SR2-18-Sp2_coassembly_scaffold_200544_23
unknown

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19155..19289
DNA (135bp) protein (45aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_200544_24
R_OP11_Amesbacteria_48_32, Amesbacteria, Microgenomates, Bacteria

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19412..19912
DNA (501bp) protein (167aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32_curated
SR2-18-Sp2_coassembly_scaffold_200544_25
GWA2_OP11_40_7b, Woesebacteria, Microgenomates, Bacteria

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19927..20328
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003821BA2
RDD domain containing protein {ECO:0000313|EMBL:KKR73186.1}; TaxID=1618562 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA2_40_7.;"
RDD domain-containing protein
SR2-18-Sp2_coassembly_scaffold_200544_26
GWA2_OP11_47_70_partial, Amesbacteria, Microgenomates, Bacteria

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20375..21421
DNA (1047bp) protein (349aa)
Protein RecA (Fragment) n=1 Tax=uncultured bacterium RepID=K2FNH0_9BACT
Protein RecA {ECO:0000313|EMBL:KKU80119.1}; TaxID=1618359 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_70.;"
recA; recombination protein RecA
SR2-18-Sp2_coassembly_scaffold_200544_27
R_OP11_Gottesmanbacteria_46_14, Gottesmanbacteria, Microgenomates, Bacteria

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21411..21827
DNA (417bp) protein (139aa)
regulatory protein RecX; K03565 regulatory protein id=67013 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_46_14_curated
SR2-18-Sp2_coassembly_scaffold_200544_28
GWB1_OP11_48_13, Amesbacteria, Microgenomates, Bacteria

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21824..22990
DNA (1167bp) protein (389aa)
Ribonuclease Y n=1 Tax=uncultured bacterium RepID=K2EVB5_9BACT
Ribonuclease Y {ECO:0000313|EMBL:KKU98459.1}; TaxID=1618362 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWB1_48_13.;"
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_200544_29
GWA2_OP11_47_70_partial, Amesbacteria, Microgenomates, Bacteria

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23072..23344
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ET46_9BACT
Histone family protein DNA-binding protein {ECO:0000313|EMBL:KKU80116.1}; TaxID=1618359 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_70.;"
histone family protein DNA-binding protein
Displaying items 1-30 of 33 in total

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