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SR2-18-Sp2_coassembly_scaffold_273245

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-Sp2_coassembly_scaffold_273245_1
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

158..718
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QK01_9MYCO
hypothetical protein
Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
SR2-18-Sp2_coassembly_scaffold_273245_2
unknown

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864..1655
DNA (792bp) protein (264aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_273245_3
unknown

Not on your lists

1684..2487
DNA (804bp) protein (268aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_273245_4
GWB1_OP11_47_19, Amesbacteria, Microgenomates, Bacteria

Not on your lists

2484..4229
DNA (1746bp) protein (582aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU67409.1}; Flags: Fragment;; TaxID=1618360 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWB1_47_19.;"
SR2-18-Sp2_coassembly_scaffold_273245_5
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

4276..5862
DNA (1587bp) protein (529aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS43038.1}; TaxID=1618378 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWA2_42_17.;"
SR2-18-Sp2_coassembly_scaffold_273245_6
GWC2_OP11_45_19, Amesbacteria, Microgenomates, Bacteria

Not on your lists

5859..6320
DNA (462bp) protein (154aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU02966.1}; TaxID=1618366 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWC2_45_19.;"
SR2-18-Sp2_coassembly_scaffold_273245_7
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

6338..7099
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ESE4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS32530.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
SR2-18-Sp2_coassembly_scaffold_273245_8
R_OP11_Amesbacteria_48_32, Amesbacteria, Microgenomates, Bacteria

Not on your lists

7116..8138
DNA (1023bp) protein (341aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=74872 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32_curated
SR2-18-Sp2_coassembly_scaffold_273245_9
unknown

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8135..8638
DNA (504bp) protein (168aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_273245_10
unknown

Not on your lists

8611..9165
DNA (555bp) protein (185aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_273245_11
GWA1_OP11_44_24, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(9149..9370)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57725.1}; TaxID=1618351 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA1_44_24.;"
SR2-18-Sp2_coassembly_scaffold_273245_12
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(9355..9579)
DNA (225bp) protein (75aa)
rpsP; ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=91458 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
30S ribosomal protein S16
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
SR2-18-Sp2_coassembly_scaffold_273245_13
GWA1_OP11_47_16, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(9592..10251)
DNA (660bp) protein (220aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=uncultured bacterium RepID=K2DJ69_9BACT
Ribonuclease 3 {ECO:0000313|EMBL:KKU63669.1}; TaxID=1618353 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA1_47_16.;"
SR2-18-Sp2_coassembly_scaffold_273245_14
R_OP11_Amesbacteria_48_32, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(10244..10810)
DNA (567bp) protein (189aa)
nusB; antitermination protein NusB; K03625 N utilization substance protein B id=15191299 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
NusB antitermination factor
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32_curated
SR2-18-Sp2_coassembly_scaffold_273245_15
GWA2_OP11_47_11b, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(11028..12875)
DNA (1848bp) protein (616aa)
dev:DhcVS_1051 recG; ATP-dependent DNA helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.1.-] id=71771 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KKU57830.1}; TaxID=1618358 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_11b.;"
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_273245_16
Microgenomates bacterium GW2011_GWC1_46_20, Microgenomates, Bacteria

Not on your lists

12985..13662
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D0U4B2_9GAMM id=131545 bin=ACD7 species=uncultured SUP05 cluster bacterium genus=unknown taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKU29290.1}; TaxID=1618528 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_46_20.;"
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_273245_17
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

13904..16345
DNA (2442bp) protein (814aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS32551.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
1A family penicillin-binding protein id=15191306 bin=GWC1_OP11_49_16_COMPLETE species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_273245_18
Microgenomates bacterium GW2011_GWC1_46_20, Microgenomates, Bacteria

Not on your lists

comp(16301..18085)
DNA (1785bp) protein (595aa)
cob:COB47_1273 phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] id=725466 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Phenylalanyl-tRNA synthetase subunit beta {ECO:0000313|EMBL:KKU28865.1}; TaxID=1618528 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_46_20.;"
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_273245_19
GWA2_OP11_47_11, Amesbacteria, Microgenomates, Bacteria

Not on your lists


comp(18087..19823)
DNA (1737bp) protein (579aa)
glo:Glov_1873 pheS; phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] id=41783 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Phenylalanine-tRNA ligase alpha subunit {ECO:0000313|EMBL:KKU56085.1}; TaxID=1618357 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_11.;"
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_273245_20
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

comp(19892..20368)
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ16962.1}; TaxID=1619098 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
SR2-18-Sp2_coassembly_scaffold_273245_21
Microgenomates bacterium GW2011_GWC1_46_20, Microgenomates, Bacteria

Not on your lists


comp(20433..20786)
DNA (354bp) protein (118aa)
50S ribosomal protein L20 {ECO:0000313|EMBL:KKU28867.1}; TaxID=1618528 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_46_20.;"
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 id=15191309 bin=GWC1_OP11_49_16_COMPLETE species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
rplT; 50S ribosomal protein L20
SR2-18-Sp2_coassembly_scaffold_273245_22
GWA2_OP11_47_70_partial, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(20970..21479)
DNA (510bp) protein (170aa)
translation initiation factor IF-3 n=1 Tax=Aerococcus viridans RepID=UPI00031E2D1D
Translation initiation factor IF-3 {ECO:0000313|EMBL:KKU80267.1}; TaxID=1618359 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_70.;"
infC; translation initiation factor IF-3
SR2-18-Sp2_coassembly_scaffold_273245_23
Microgenomates bacterium GW2011_GWC1_47_20, Microgenomates, Bacteria

Not on your lists

comp(21476..23206)
DNA (1731bp) protein (577aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0J6_THERP id=5087213 bin=GWF1_OP11_31_35_complete species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Threonine-tRNA ligase {ECO:0000313|EMBL:KKU68646.1}; TaxID=1618529 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_47_20.;"
SR2-18-Sp2_coassembly_scaffold_273245_24
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(23349..24194)
DNA (846bp) protein (282aa)
Endonuclease IV (EC:3.1.21.- 3.1.21.2)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00036A1B57
Putative endonuclease 4 {ECO:0000313|EMBL:KKS32560.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
SR2-18-Sp2_coassembly_scaffold_273245_trna_1
unknown

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24217..24288
DNA (72bp)
transferRNA Val
SR2-18-Sp2_coassembly_scaffold_273245_25
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24289..25356)
DNA (1068bp) protein (356aa)
GntR family transcriptional regulator n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WYF3_9BURK
GntR family transcriptional regulator {ECO:0000313|EMBL:EON12254.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
2-aminoadipate aminotransferase
SR2-18-Sp2_coassembly_scaffold_273245_26
GWA1_OP11_47_20, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(25353..26189)
DNA (837bp) protein (279aa)
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I814_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KKU67694.1}; TaxID=1618354 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA1_47_20.;"
PEP phosphonomutase-like enzyme
SR2-18-Sp2_coassembly_scaffold_273245_27
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(26375..26986)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AL86_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS32561.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
SR2-18-Sp2_coassembly_scaffold_273245_28
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(27005..27655)
DNA (651bp) protein (217aa)
Trigger factor n=1 Tax=uncultured bacterium RepID=K2DKL7_9BACT
Trigger factor {ECO:0000313|EMBL:KKS32562.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
trigger factor
SR2-18-Sp2_coassembly_scaffold_273245_29
GWA2_OP11_47_70_partial, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(27655..28254)
DNA (600bp) protein (200aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KRC4_9FIRM
Peptidyl-prolyl cis-trans isomerase cyclophilin type {ECO:0000313|EMBL:KKU79011.1}; TaxID=1618359 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_70.;"
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Displaying items 1-30 of 51 in total

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